Non-Coding RNA Search

Ss1.1-Pig4-TMW8048B01.5

Sequence:


               
               GGCCAAGTCACCTTCTTACCTCCCAGCTACCTCTCATGTGGCAACTCTACCCTGAGGAGC
GCTACATGGATAACAACTCTCGCTTGTGGCAGATCCAGCATCACTTAATGGTACACATGT
TGCTTAATAATTGTTCATTGTGCTGGGACTCGTAGGACAGAGTACTCTAAACTTGTCTTT
TCCTGACAGGTCAGGGGAGTACAGGAGCTGTTGCTTAAGCTTTTGCCTGATGATTAATCT
GGTGCTGGGATCTGGGAAGATAAGCCCCTCTGCTCTGTTCAGTACATGGCAGTCACGTCA
TCCGTCCCTGCAGTGCACCCCCCCGTGGGCCTGGGGGGAGGGAGGGGGTTGAAAAACTGT
TCAAGAACACGGAAGTTTAGGAAGGGCCATGAAGAACACCGAAAGCGGAACTGCAGAAAA
AGGGTTATGCAGGCAGAAAGCAAGTCGACAAAAGCACTTAGTTAGGACACGTAACTTGAA
ATTGACTCCTTTGGAAATTGCCATAGAACCTTTAATGGACATCATCAGCTGGAACTGGGA
TCTGATGAATCCCCCAAAAGTCAGCACCTGCTACAGAACAGATGCCCTGATCACCAAGGA
CTTGGTACTGATTTAGAGAGAAGAGAGCAGCATCAACATCTATTTGTCGCTTATTGCCCT
GCAGCAATCCACCTGCCTTTCCTTCTCCCATCCTGTAAATATCCCAGATTTTGCTCCAGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCCAAGTCACCTTCTTACCTCCCAGCTACCTCTCATGTGGCAACTCTACCCTGAGGAGC
GCTACATGGATAACAACTCTCGCTTGTGGCAGATCCAGCATCACTTAATGGTACACATGT
TGCTTAATAATTGTTCATTGTGCTGGGACTCGTAGGACAGAGTACTCTAAACTTGTCTTT
TCCTGACAGGTCAGGGGAGTACAGGAGCTGTTGCTTAAGCTTTTGCCTGATGATTAATCT
GGTGCTGGGATCTGGGAAGATAAGCCCCTCTGCTCTGTTCAGTACATGGCAGTCACGTCA
TCCGTCCCTGCAGTGCACCCCCCCGTGGGCCTGGGGGGAGGGAGGGGGTTGAAAAACTGT
TCAAGAACACGGAAGTTTAGGAAGGGCCATGAAGAACACCGAAAGCGGAACTGCAGAAAA
AGGGTTATGCAGGCAGAAAGCAAGTCGACAAAAGCACTTAGTTAGGACACGTAACTTGAA
ATTGACTCCTTTGGAAATTGCCATAGAACCTTTAATGGACATCATCAGCTGGAACTGGGA
TCTGATGAATCCCCCAAAAGTCAGCACCTGCTACAGAACAGATGCCCTGATCACCAAGGA
CTTGGTACTGATTTAGAGAGAAGAGAGCAGCATCAACATCTATTTGTCGCTTATTGCCCT
GCAGCAATCCACCTGCCTTTCCTTCTCCCATCCTGTAAATATCCCAGATTTTGCTCCAGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13096473|pdb|1QTU|A

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13096473|pdb|1QTU|A

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               241-720, gnl|bosTau2|chrX (13170286-13170779)
               

               
               241-720, gnl|Hg17|chrX (153857379-153856890)
               

               
               241-720, gnl|Mm7|chrX (70797781-70797281)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               241-720, gnl|bosTau2|chrX (13170286-13170779)
               

               
               241-720, gnl|Hg17|chrX (153857379-153856890)
               

               
               241-720, gnl|Mm7|chrX (70797781-70797281)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	241-720, gnl\|bosTau2\|chrX (13170286-13170779)
	241-720, gnl\|Hg17\|chrX (153857379-153856890)
	241-720, gnl\|Mm7\|chrX (70797781-70797281)