Non-Coding RNA Search

Ss1.1-Pig4-TMW8048F18.5

Sequence:


               
               GAGTATTTGTAGAAATGCAGATTACATTGCAAATGGAACTCTTTGCCAGGAAGACATATG
GATTTTGCTTTTCATTCTTTGAGACAGTTGACGTTGTCTTAGGGACTGACCTTCCAGCAT
CAAAGAAATACATATCTACTGTATCCGCCAAAGTTTGTGATGCCTGCATAGACGCTTACT
TGTTAAAAAAAAAGAAAAAGTACAAAAAAAGTACAAAAAAAAAACCCCCCCCCCAAAAAA
AACACCACAATTGAATTGCCTTTGAAAGTGGGAGATGATCTGTCTCCAACAGATTGAAAA
AAAAAAATGCTTCTTAAAAATGTGTATGTTTTGTATTCTTTTTTTCTAGTAGAAAATAAC
TGACTTGAAATATTGGTGGTTTTTTTTTTCTTAGTGACGTGTGTTGCTTTTGTGTGTAAT
AATATTTGAATGTAATTACAGCAGTGCCAATTTGCCAAAGATGTTGGACATATTTTTCTT
TTGTTGGGAGAAGGGCAGGGGCTGGGGGTGGGACTTGGGAGAAAACAGGGGCGGGATTTT
GGTTTAATTTTTTAACTTTTTTTTTCTTGTCAAACCTGGAATTTGTGATTTTATCCTAAG
TTAAATGGTTGACTGCAACACATTTATTTTAGATTAGTTGGAAAAACTTGCAATAAGATT
GGCGTAGTTTCAATATCTGTGTGTCTTTTCATGAGTGACTGTTACTTGTGAAGAATTGAT
TTTATGTAACCTTTATGTGAGATAATTATTTGTAAATATTTGCCATAATTTTATTGGTTC
CTAAAATAAAAGTAATTTTTTAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGTATTTGTAGAAATGCAGATTACATTGCAAATGGAACTCTTTGCCAGGAAGACATATG
GATTTTGCTTTTCATTCTTTGAGACAGTTGACGTTGTCTTAGGGACTGACCTTCCAGCAT
CAAAGAAATACATATCTACTGTATCCGCCAAAGTTTGTGATGCCTGCATAGACGCTTACT
TGTTAAAAAAAAAGAAAAAGTACAAAAAAAGTACAAAAAAAAAACCCCCCCCCCAAAAAA
AACACCACAATTGAATTGCCTTTGAAAGTGGGAGATGATCTGTCTCCAACAGATTGAAAA
AAAAAAATGCTTCTTAAAAATGTGTATGTTTTGTATTCTTTTTTTCTAGTAGAAAATAAC
TGACTTGAAATATTGGTGGTTTTTTTTTTCTTAGTGACGTGTGTTGCTTTTGTGTGTAAT
AATATTTGAATGTAATTACAGCAGTGCCAATTTGCCAAAGATGTTGGACATATTTTTCTT
TTGTTGGGAGAAGGGCAGGGGCTGGGGGTGGGACTTGGGAGAAAACAGGGGCGGGATTTT
GGTTTAATTTTTTAACTTTTTTTTTCTTGTCAAACCTGGAATTTGTGATTTTATCCTAAG
TTAAATGGTTGACTGCAACACATTTATTTTAGATTAGTTGGAAAAACTTGCAATAAGATT
GGCGTAGTTTCAATATCTGTGTGTCTTTTCATGAGTGACTGTTACTTGTGAAGAATTGAT
TTTATGTAACCTTTATGTGAGATAATTATTTGTAAATATTTGCCATAATTTTATTGGTTC
CTAAAATAAAAGTAATTTTTTAAG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-804, gnl|bosTau2|chr8 (29642872-29642083)
               

               
               1-804, gnl|Hg17|chr9 (36824064-36823276)
               

               
               1-804, gnl|Mm7|chr4 (44539346-44538572)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-804, gnl|bosTau2|chr8 (29642872-29642083)
               

               
               1-804, gnl|Hg17|chr9 (36824064-36823276)
               

               
               1-804, gnl|Mm7|chr4 (44539346-44538572)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               lnt (0.142308)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               lnt (0.142308)

	1-804, gnl\|bosTau2\|chr8 (29642872-29642083)
	1-804, gnl\|Hg17\|chr9 (36824064-36823276)
	1-804, gnl\|Mm7\|chr4 (44539346-44538572)