Ss1.1-Pig4-TMW8049K10.5
Sequence: | Distiller database | More info |
Sequence: | Distiller database | Help | Less info |
CTCTCTCATCCCAATATCCACAGGACCATTTTGGAAGGCATATCATCTGTGTTTGGCACA ACAGGTAAAGATAAGATTGAAGTGTCTGAGGATAACTTGAAGAAACTCCCTCTAATTCAG TGGTGTATTTTGGAAACCATTCGTTTACGGGCCCCTGGTGTCATTACTAGAAAAGTGCTG AAGCCAGTTAAAATTTTGAATTACACCGTTCCTTCTGGCGACTTGTTGATGTTGTCTCCG TTTTGGCTACATAGAAATCCAAAGTATTTTCCTGAACCTGACCTGTTCAAGCCTGAACGT TGGAAAAAGGCAAATTTAGAGAAGCATGCTTTCTTGGACTGGTTCATGGCATTTGGGACC GGGAAGTACCAGTGTCCTGGAAGGTGGCTTGCTCTGTTGGAGATTCAAATGTGTGTTATT TTAATATTTTATTATTATGACTGTACTCTTCTAGACCCCTTGCCAAAACAGAGTTCTCTC CATTTGGTGGGTGTCCAGCAGCCGGAAGGACAATGCCGAGTTGAATTTAAACAGAGGAAA TGACCTCTGCGGGCCCCCAGGAGGGCCAGGGCCTTCTGGAGGAGTGACTGCCCCACATCC GCTGGCAGCGCCTGGACCTGAGTTCGACTGAAAGACGTCCCTTCATTTTGTTTTGGGATT TAGTTCAAGACAGCGCCCAGATGGGATGTGCGTGTGTTTAAGATGACATCGCTGTCACTG ATAGGAAGACCCCCCAATATAGGGCTTATAGAAAAATGTTTAAATGGTCAAAAAAGGGGC ATTTCTTCAAAAGTTGGAGTTTGGTTTCATGCATACCTGTATCAAAACTACATAGAAACA ATGTCATTTGAATGAAAATTTTGGTACGTTAAATTCATTGTGAAAGCAACATATTTAAAC TTCAAATTTGAAAAAGGCTAAAAGTCTTAGACTCTACCAAGTACGAAATAATGATCTCTG GAAATTGCTATTTTTCTTAACCAGCAATTGGAATTCTTTTTTGGTCTTTTTTTTTTTTTT |
Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
CTCTCTCATCCCAATATCCACAGGACCATTTTGGAAGGCATATCATCTGTGTTTGGCACA ACAGGTAAAGATAAGATTGAAGTGTCTGAGGATAACTTGAAGAAACTCCCTCTAATTCAG TGGTGTATTTTGGAAACCATTCGTTTACGGGCCCCTGGTGTCATTACTAGAAAAGTGCTG AAGCCAGTTAAAATTTTGAATTACACCGTTCCTTCTGGCGACTTGTTGATGTTGTCTCCG TTTTGGCTACATAGAAATCCAAAGTATTTTCCTGAACCTGACCTGTTCAAGCCTGAACGT TGGAAAAAGGCAAATTTAGAGAAGCATGCTTTCTTGGACTGGTTCATGGCATTTGGGACC GGGAAGTACCAGTGTCCTGGAAGGTGGCTTGCTCTGTTGGAGATTCAAATGTGTGTTATT TTAATATTTTATTATTATGACTGTACTCTTCTAGACCCCTTGCCAAAACAGAGTTCTCTC CATTTGGTGGGTGTCCAGCAGCCGGAAGGACAATGCCGAGTTGAATTTAAACAGAGGAAA TGACCTCTGCGGGCCCCCAGGAGGGCCAGGGCCTTCTGGAGGAGTGACTGCCCCACATCC GCTGGCAGCGCCTGGACCTGAGTTCGACTGAAAGACGTCCCTTCATTTTGTTTTGGGATT TAGTTCAAGACAGCGCCCAGATGGGATGTGCGTGTGTTTAAGATGACATCGCTGTCACTG ATAGGAAGACCCCCCAATATAGGGCTTATAGAAAAATGTTTAAATGGTCAAAAAAGGGGC ATTTCTTCAAAAGTTGGAGTTTGGTTTCATGCATACCTGTATCAAAACTACATAGAAACA ATGTCATTTGAATGAAAATTTTGGTACGTTAAATTCATTGTGAAAGCAACATATTTAAAC TTCAAATTTGAAAAAGGCTAAAAGTCTTAGACTCTACCAAGTACGAAATAATGATCTCTG GAAATTGCTATTTTTCTTAACCAGCAATTGGAATTCTTTTTTGGTCTTTTTTTTTTTTTT |
Aligned organism(s): 26 entry(ies) | More info |
Aligned organism(s): 26 entry(ies) | Help | Less info |
62-198, gnl|bosTau2|chr23 (19023945-19024081) | |
62-198, gnl|canFam2|chr12 (17761696-17761858) | |
62-198, gnl|danRer3|chr20 (46177688-46177834) | |
62-198, gnl|dasNov1|scaffold_19457 (39204-39369) | |
62-198, gnl|echTel1|scaffold_80508 (4956-4794) | |
62-198, gnl|galGal2|chr3 (107682681-107682850) | |
62-198, gnl|hg17|chr6 (46671659-46671821) | |
62-198, gnl|Hg17|chr6 (46671819-46671683) | |
62-198, gnl|mm7|chr17 (41846342-41846179) | |
62-198, gnl|Mm7|chr17 (41846179-41846315) | |
62-198, gnl|monDom2|scaffold_0 (193265543-193265381) | |
62-198, gnl|oryCun1|scaffold_132864 (20176-20014) | |
62-198, gnl|panTro1|chr5 (47421563-47421725) | |
62-198, gnl|rheMac2|chr4 (46421864-46422026) | |
62-198, gnl|rn3|chr9 (12947529-12947691) | |
470-824, gnl|bosTau2|chr23 (19054138-19054496) | |
470-824, gnl|canFam2|chr12 (17731889-17732438) | |
470-824, gnl|hg17|chr6 (46625771-46626326) | |
470-824, gnl|Hg17|chr6 (46626135-46625770) | |
470-824, gnl|loxAfr1|scaffold_33798 (40223-40820) | |
470-824, gnl|mm7|chr17 (41870977-41870477) | |
470-824, gnl|Mm7|chr17 (41870662-41870974) | |
470-824, gnl|oryCun1|scaffold_173546 (43516-44013) | |
470-824, gnl|panTro1|chr5 (47375120-47375672) | |
470-824, gnl|rheMac2|chr4 (46374537-46375092) | |
470-824, gnl|rn3|chr9 (12924674-12925169) |
Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
62-198, gnl|bosTau2|chr23 (19023945-19024081) | |
62-198, gnl|canFam2|chr12 (17761696-17761858) | |
62-198, gnl|danRer3|chr20 (46177688-46177834) | |
62-198, gnl|dasNov1|scaffold_19457 (39204-39369) | |
62-198, gnl|echTel1|scaffold_80508 (4956-4794) | |
62-198, gnl|galGal2|chr3 (107682681-107682850) | |
62-198, gnl|hg17|chr6 (46671659-46671821) | |
62-198, gnl|Hg17|chr6 (46671819-46671683) | |
62-198, gnl|mm7|chr17 (41846342-41846179) | |
62-198, gnl|Mm7|chr17 (41846179-41846315) | |
62-198, gnl|monDom2|scaffold_0 (193265543-193265381) | |
62-198, gnl|oryCun1|scaffold_132864 (20176-20014) | |
62-198, gnl|panTro1|chr5 (47421563-47421725) | |
62-198, gnl|rheMac2|chr4 (46421864-46422026) | |
62-198, gnl|rn3|chr9 (12947529-12947691) | |
470-824, gnl|bosTau2|chr23 (19054138-19054496) | |
470-824, gnl|canFam2|chr12 (17731889-17732438) | |
470-824, gnl|hg17|chr6 (46625771-46626326) | |
470-824, gnl|Hg17|chr6 (46626135-46625770) | |
470-824, gnl|loxAfr1|scaffold_33798 (40223-40820) | |
470-824, gnl|mm7|chr17 (41870977-41870477) | |
470-824, gnl|Mm7|chr17 (41870662-41870974) | |
470-824, gnl|oryCun1|scaffold_173546 (43516-44013) | |
470-824, gnl|panTro1|chr5 (47375120-47375672) | |
470-824, gnl|rheMac2|chr4 (46374537-46375092) | |
470-824, gnl|rn3|chr9 (12924674-12925169) |
Expressed library(ies): 5 entry(ies) | More info |
Expressed library(ies): 5 entry(ies) | Help | Less info |
bla (0.248694) | |
sin (0.174948) | |
rec (0.17307) | |
cje (0.165235) | |
ski (0.146735) |
Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
bla (0.248694) | |
sin (0.174948) | |
rec (0.17307) | |
cje (0.165235) | |
ski (0.146735) |