Non-Coding RNA Search

Ss1.1-Pig4-TMW8049M02.5

Sequence:


               
               GTTCCTAGTCAGATTTGTTTCTGCTGCGCCACAACGGGAACTCCTATTTTTTAATTTTTA
AAAGATTTTTATTTTTTCTATTATAGTTGATTTATATAATTTTTTCCATTATAGTTGGTT
AGCAAAGTGACCTCAATTTTCTACTATATATTTATATATATATATATGCACACACACACA
TATTCGTTTTCTCAAATTATCCTCCATCATGTTCCATCACAAGTGACTAGATGTAGTTCC
CTGTGCTATACAGCAGGATCTCATTGCTTATCCACTCCAAATGCAATAGTTTGCATCTAC
TAACCCCAAACTCCCAGTCCATCCCACTCCTTCCCCTCCCCCTTGACAACCCCAAGTCTG
TTCTCCAAGTCCATGAGTTTCTTTTCTGTGAAAAGGTTCATTTGTGCCTTATGTCAGATT
CCAGATATAAGTGATATCATATGGTATTTGTCTTTCTCTTTCTGACTTACTTCACTTAGT
ATGAGAGTTTCTAGTTCTATTCATGTTGTTGCAAATGGCATTATTTTGTTCTTTTTTTTA
TGGATGAGTAGTTTGTGTAACTTTATAACTGACAAATTAAAAGTTCCAGATGTGCTAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTCCTAGTCAGATTTGTTTCTGCTGCGCCACAACGGGAACTCCTATTTTTTAATTTTTA
AAAGATTTTTATTTTTTCTATTATAGTTGATTTATATAATTTTTTCCATTATAGTTGGTT
AGCAAAGTGACCTCAATTTTCTACTATATATTTATATATATATATATGCACACACACACA
TATTCGTTTTCTCAAATTATCCTCCATCATGTTCCATCACAAGTGACTAGATGTAGTTCC
CTGTGCTATACAGCAGGATCTCATTGCTTATCCACTCCAAATGCAATAGTTTGCATCTAC
TAACCCCAAACTCCCAGTCCATCCCACTCCTTCCCCTCCCCCTTGACAACCCCAAGTCTG
TTCTCCAAGTCCATGAGTTTCTTTTCTGTGAAAAGGTTCATTTGTGCCTTATGTCAGATT
CCAGATATAAGTGATATCATATGGTATTTGTCTTTCTCTTTCTGACTTACTTCACTTAGT
ATGAGAGTTTCTAGTTCTATTCATGTTGTTGCAAATGGCATTATTTTGTTCTTTTTTTTA
TGGATGAGTAGTTTGTGTAACTTTATAACTGACAAATTAAAAGTTCCAGATGTGCTAAAA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               44-501, gnl|bosTau2|chr1 (83072707-83072250)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-501, gnl|bosTau2|chr1 (83072707-83072250)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               ctl (0.153069)
               

               
               che (0.136314)
               

               
               ste (0.135208)
               

               
               nmm (0.132802)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)
               

               
               che (0.136314)
               

               
               ste (0.135208)
               

               
               nmm (0.132802)
               

               
               eep (0.122564)
               

               
               ebs (0.118301)

	ctl (0.153069)
	che (0.136314)
	ste (0.135208)
	nmm (0.132802)
	eep (0.122564)
	ebs (0.118301)