Non-Coding RNA Search

Ss1.1-Pig4-TMW8050A07.3

Sequence:


               
               GGACTCCCCAGGGGAGGTGGCTTTCATTCTCTCAGCCCACCTTTCTGGGGGGCTTGGCTA
CCTCTTGGGGCTCCTCTCTCTGCAGGAGGGAGGTTCCTGCCTGACTTGGTTGCTTGGTGG
TAGTGGATGCAAGTAAGAGGTTTTGCATGCGAACTGTTTACGAGCTACCTGTGGAGCAGC
CTCCCGCGGCGCTGGTTATCTTTTCTAAACCGAGTGTGCGCCGAGGAATTGTTGATTACA
CGGACAGCCAGACCGACTGTTGGAGGCTTCGGCCTTTGGGCTACCTAACTATTGATTTTT
TTCCGTCCTAAAAATATTAAGCAATGAGCTAAGTTCGTCAAAGTTCGTTCCATCCTAGAA
GCTCTTTACTAGAGTTTGAGCCACACAGGAAATCGGGAAATCTAACCTTACTCCTGCTTT
AGCAGCAGCTCCCGCTTCAGCAGCCTGTGGTGTGAGGGTGTCAAGTTTAATAGTTAACTG
CTGAAGAGAAAATCATGATCTAGAGCCTTTAGGATAAATTAATTAATGCTACTTGGCTAG
GAGTTTTACCTTGTCTGAATGCTTATGATTAAATTTTAATCTTCCCTCTTAGTAGATGGA
CGGACAACTTTGTGTATTTGGTGTACACTTAGCCTTTTGCATTTTGGGTCCCTGACTTCC
TGACTTGAAATGATTGGGGTGTTGATGTGTCCATTGAGTAACCTTGTGGAATAGAATGTA
TAGTTCCCCCAGGGGGTTAGTGACCTCTCACTTCCTTTGAAGTGATTGGGTGGTTAGAGC
TGATCCATAACTATCTGTCAGAGTAGGGAGCTGCTTTCAAGTCATACTATGAAGTGGCTT
AGTTCCTTTTCTAATACATTTGTTAGGCTGCTTCTCCTATGAGGGTATAATTGGAACCCA
TGCTACATCTGTCACATGCAACTTGCAGATCATTTGTCCTGTGTCCTGGAACAGAAATCC
CATTACATAACCTTTGACTTAATGTGTACCCCAAATAGCAGATAAAAAGGTTGAGGGATA
AAGGACTTGTTTAAAGAAGTTATTGTTGAAAACCTTAGTTCTGCAAACCACAAAAGTCCA
AGGAAAAATTCTGATTTTTTTTTTCTCTCTTGTAAAGAATGTTGCTAAATATATGACAAC
ACCTTTCTGCCCCAAATTATGTGCAGGAAAGTTGCAGTATTATTTATGGGTCTCTTGTGA
CTTAATGGTTTGCTCTTACAAGTTTCAGTAAAAATCCATGATAAAAATACAGCTGTGTGC
ACCTGAGTCCGTTTGCTACATAAGTAAAGCTGTGGATGGCTATGTGTTTTAAAGCTGGAA
AGGCAAACTCGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACTCCCCAGGGGAGGTGGCTTTCATTCTCTCAGCCCACCTTTCTGGGGGGCTTGGCTA
CCTCTTGGGGCTCCTCTCTCTGCAGGAGGGAGGTTCCTGCCTGACTTGGTTGCTTGGTGG
TAGTGGATGCAAGTAAGAGGTTTTGCATGCGAACTGTTTACGAGCTACCTGTGGAGCAGC
CTCCCGCGGCGCTGGTTATCTTTTCTAAACCGAGTGTGCGCCGAGGAATTGTTGATTACA
CGGACAGCCAGACCGACTGTTGGAGGCTTCGGCCTTTGGGCTACCTAACTATTGATTTTT
TTCCGTCCTAAAAATATTAAGCAATGAGCTAAGTTCGTCAAAGTTCGTTCCATCCTAGAA
GCTCTTTACTAGAGTTTGAGCCACACAGGAAATCGGGAAATCTAACCTTACTCCTGCTTT
AGCAGCAGCTCCCGCTTCAGCAGCCTGTGGTGTGAGGGTGTCAAGTTTAATAGTTAACTG
CTGAAGAGAAAATCATGATCTAGAGCCTTTAGGATAAATTAATTAATGCTACTTGGCTAG
GAGTTTTACCTTGTCTGAATGCTTATGATTAAATTTTAATCTTCCCTCTTAGTAGATGGA
CGGACAACTTTGTGTATTTGGTGTACACTTAGCCTTTTGCATTTTGGGTCCCTGACTTCC
TGACTTGAAATGATTGGGGTGTTGATGTGTCCATTGAGTAACCTTGTGGAATAGAATGTA
TAGTTCCCCCAGGGGGTTAGTGACCTCTCACTTCCTTTGAAGTGATTGGGTGGTTAGAGC
TGATCCATAACTATCTGTCAGAGTAGGGAGCTGCTTTCAAGTCATACTATGAAGTGGCTT
AGTTCCTTTTCTAATACATTTGTTAGGCTGCTTCTCCTATGAGGGTATAATTGGAACCCA
TGCTACATCTGTCACATGCAACTTGCAGATCATTTGTCCTGTGTCCTGGAACAGAAATCC
CATTACATAACCTTTGACTTAATGTGTACCCCAAATAGCAGATAAAAAGGTTGAGGGATA
AAGGACTTGTTTAAAGAAGTTATTGTTGAAAACCTTAGTTCTGCAAACCACAAAAGTCCA
AGGAAAAATTCTGATTTTTTTTTTCTCTCTTGTAAAGAATGTTGCTAAATATATGACAAC
ACCTTTCTGCCCCAAATTATGTGCAGGAAAGTTGCAGTATTATTTATGGGTCTCTTGTGA
CTTAATGGTTTGCTCTTACAAGTTTCAGTAAAAATCCATGATAAAAATACAGCTGTGTGC
ACCTGAGTCCGTTTGCTACATAAGTAAAGCTGTGGATGGCTATGTGTTTTAAAGCTGGAA
AGGCAAACTCGC

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-1330, gnl|bosTau2|chr29 (32145502-32144140)
               

               
               1-1330, gnl|Hg17|chr11 (62250546-62248933)
               

               
               1-1330, gnl|Mm7|chr19 (8501110-8502527)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1330, gnl|bosTau2|chr29 (32145502-32144140)
               

               
               1-1330, gnl|Hg17|chr11 (62250546-62248933)
               

               
               1-1330, gnl|Mm7|chr19 (8501110-8502527)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               hlv (0.139256)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hlv (0.139256)

	1-1330, gnl\|bosTau2\|chr29 (32145502-32144140)
	1-1330, gnl\|Hg17\|chr11 (62250546-62248933)
	1-1330, gnl\|Mm7\|chr19 (8501110-8502527)