Ss1.1-Pig4-TMW8050F13.5
|
GCACCGGGCAGTAGGCCCGGTCGTTCTGTTGGGCAGGAAGATGGCGGCCTCGGGCGCAGC
GCCGCAAATCCTGGTACAATACTTGGTATTACGGAAGGATCTCTCACAGACTCCATTTTC
CTGGCCAGCGGGCGCACTGGTAGCACAGGGTTGTCACGCAGCCACCGCGGCTTTGCACAT
TTACCGCGACCACCCGCACACTGCAGCTTACCTCCAGGACCTGGAGCGCATGCGCAAGGT
GGTCCTCGAGGCCCCAGATGAGACCACCCTAAAGGCACTGGCCGAGACGCTGCAAGAGAA
GAACATTGACCACAAGCTGTGGCTGGAGCAGCCAGAGAACATCCCCACCTGCATCGCACT
CCGTCCCTACCCCAAGGAAGAAGTGGGCCAGTATCTGAAGAAGTTCCGACTATTCAAGTA
ACTGGTGTTAGCAGTTGCTTTGATACGTTTGAATATCAGCTGGACCCAGAAACTGCATGC
TGTCTGTCCTTAAGCATCCCATACCCCTTCCAGGGGCACGTCCCTCTTCCTTTAAATTTT
GACAGTTTCTTGAGGGTCAAACACATGTTCACATTAAAGTTGTCATTAATAAGTACTTCT
TTTTAATTATTAAGTAAGTTCAGATGGGGAAAGGGGTGAGTAGCAGTATCCTCTATGGGT
CATTCATTGTTCAAGCAGAAAATTCGGTTAGACTCCTATTTAGGGGCAAGGCAATGCTCT
TTACTTTTTGTTAGGAAAGACTGAGTTCTTCCCATCACCCAGATTTAAAGTGTTTCCTTT
GACTTTCTTATTTCTGATTCACATCCACGGATTGTAATCATTGAATCTAGGACACCATCA
ACTTTAAGATATACCATTATCTTACATGTTATGAAGAAAGAAGAGATGCTTCCAATTAAA
TTGAGACGTGCGATTAATGATAAGATGTATTTCAGTTTCAAAGATGCTTACATTTATTTA
TTTGACTTAATAAAATACATCCAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCACCGGGCAGTAGGCCCGGTCGTTCTGTTGGGCAGGAAGATGGCGGCCTCGGGCGCAGC
GCCGCAAATCCTGGTACAATACTTGGTATTACGGAAGGATCTCTCACAGACTCCATTTTC
CTGGCCAGCGGGCGCACTGGTAGCACAGGGTTGTCACGCAGCCACCGCGGCTTTGCACAT
TTACCGCGACCACCCGCACACTGCAGCTTACCTCCAGGACCTGGAGCGCATGCGCAAGGT
GGTCCTCGAGGCCCCAGATGAGACCACCCTAAAGGCACTGGCCGAGACGCTGCAAGAGAA
GAACATTGACCACAAGCTGTGGCTGGAGCAGCCAGAGAACATCCCCACCTGCATCGCACT
CCGTCCCTACCCCAAGGAAGAAGTGGGCCAGTATCTGAAGAAGTTCCGACTATTCAAGTA
ACTGGTGTTAGCAGTTGCTTTGATACGTTTGAATATCAGCTGGACCCAGAAACTGCATGC
TGTCTGTCCTTAAGCATCCCATACCCCTTCCAGGGGCACGTCCCTCTTCCTTTAAATTTT
GACAGTTTCTTGAGGGTCAAACACATGTTCACATTAAAGTTGTCATTAATAAGTACTTCT
TTTTAATTATTAAGTAAGTTCAGATGGGGAAAGGGGTGAGTAGCAGTATCCTCTATGGGT
CATTCATTGTTCAAGCAGAAAATTCGGTTAGACTCCTATTTAGGGGCAAGGCAATGCTCT
TTACTTTTTGTTAGGAAAGACTGAGTTCTTCCCATCACCCAGATTTAAAGTGTTTCCTTT
GACTTTCTTATTTCTGATTCACATCCACGGATTGTAATCATTGAATCTAGGACACCATCA
ACTTTAAGATATACCATTATCTTACATGTTATGAAGAAAGAAGAGATGCTTCCAATTAAA
TTGAGACGTGCGATTAATGATAAGATGTATTTCAGTTTCAAAGATGCTTACATTTATTTA
TTTGACTTAATAAAATACATCCAG
|
|
gi|61966781|ref|NP_001013685.1| |
Protein identifier
|
gi|61966781|ref|NP_001013685.1| |
|
1-251, gnl|bosTau2|chr11 (53535504-53535254) |
|
1-251, gnl|canFam2|chr17 (22122510-22122751) |
|
1-251, gnl|danRer3|chr20 (30106254-30106009) |
|
1-251, gnl|echTel1|scaffold_288593 (46803-46562) |
|
1-251, gnl|fr1|chrUn (277920362-277920598) |
|
1-251, gnl|galGal2|chr3 (103434516-103434272) |
|
1-251, gnl|hg17|chr2 (24927642-24927883) |
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1-251, gnl|Hg17|chr2 (24927895-24927645) |
|
1-251, gnl|loxAfr1|scaffold_7869 (66136-66377) |
|
1-251, gnl|mm7|chr12 (4160276-4160035) |
|
1-251, gnl|Mm7|chr12 (4160021-4160271) |
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1-251, gnl|monDom2|scaffold_1 (152450475-152450245) |
|
1-251, gnl|oryCun1|scaffold_5377 (2835-3076) |
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1-251, gnl|panTro1|chr12 (25807636-25807877) |
|
1-251, gnl|rheMac2|chr13 (24716269-24716510) |
|
1-251, gnl|rn3|chr6 (27213835-27213594) |
|
1-251, gnl|tetNig1|chrUn_random (101357144-101357365) |
| |
|
534-960, gnl|bosTau2|chr11 (53531800-53531379) |
|
534-960, gnl|Hg17|chr2 (24924845-24924270) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-251, gnl|bosTau2|chr11 (53535504-53535254) |
|
1-251, gnl|canFam2|chr17 (22122510-22122751) |
|
1-251, gnl|danRer3|chr20 (30106254-30106009) |
|
1-251, gnl|echTel1|scaffold_288593 (46803-46562) |
|
1-251, gnl|fr1|chrUn (277920362-277920598) |
|
1-251, gnl|galGal2|chr3 (103434516-103434272) |
|
1-251, gnl|hg17|chr2 (24927642-24927883) |
|
1-251, gnl|Hg17|chr2 (24927895-24927645) |
|
1-251, gnl|loxAfr1|scaffold_7869 (66136-66377) |
|
1-251, gnl|mm7|chr12 (4160276-4160035) |
|
1-251, gnl|Mm7|chr12 (4160021-4160271) |
|
1-251, gnl|monDom2|scaffold_1 (152450475-152450245) |
|
1-251, gnl|oryCun1|scaffold_5377 (2835-3076) |
|
1-251, gnl|panTro1|chr12 (25807636-25807877) |
|
1-251, gnl|rheMac2|chr13 (24716269-24716510) |
|
1-251, gnl|rn3|chr6 (27213835-27213594) |
|
1-251, gnl|tetNig1|chrUn_random (101357144-101357365) |
| |
|
534-960, gnl|bosTau2|chr11 (53531800-53531379) |
|
534-960, gnl|Hg17|chr2 (24924845-24924270) |
|
tes (0.207814) |
|
sto (0.179824) |
|
sin (0.174948) |
|
cje (0.165235) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
ute (0.132784) |
|
kid (0.129735) |
|
sug (0.127291) |
|
eru (0.120048) |
|
med (0.116252) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
|
tes (0.207814) |
|
sto (0.179824) |
|
sin (0.174948) |
|
cje (0.165235) |
|
ssp (0.13552) |
|
pla (0.133672) |
|
ute (0.132784) |
|
kid (0.129735) |
|
sug (0.127291) |
|
eru (0.120048) |
|
med (0.116252) |
|
ecc (0.115035) |
|
nbm (0.0993246) |
|
jej (0.0989218) |
|
eje (0.0988338) |
