Non-Coding RNA Search

Ss1.1-Pig4-TMW8050G22.5

Sequence:


               
               TTTACTTCCAGAAATTCAGTTGTTGTAGGAATTTTACAGTTCACTTAATTGGGTTTTCCT
TTGGTGGATGACAACCTTACCTTGGATTTTTAGAAACCTGTGATTCCTGAGTTTTTGCAA
TAAGCAAAATCCTGCAGGTAGGATTGATACTAGATTGAACAGATAATGACTTTAAGACAA
AGAATTGTAGATTTTTGGAATAGATAGAGAACTTTTAAAATGTCTAGTACAAACAACTCA
TTTTACAGATGACAGAAGAGGCTAGGGTAAATTAGTTGCCAAGTTTATGTCTTATTGGTT
CCTGTGAAAAAAAATAATGGTAATCAAAATTCCATTTGAAGTATTTGCTCAATAAAATAA
AATTAGTTCATTATTTGACAGGATTTCAGTTTCTTGAAATCAATGCATAAGTGCAGTTTT
TTTAGCATTTTTCTATTGAAAGGTATTTAGATTTCCAGGGATAAGGAAGTAAAAGAGAAA
GTTTTAATTTTCAAAAATTCATGGATAGGTTCAGAGATGTACAGGTAACTAGAATTGATT
GATTGATGTTCCAGTAAATAAAAAGTGATGTGGAGTTATAGGATCCTTGGCAAGTAAGGA
TTTTAGATGACTATGTGCTTGTAATTTGGAAGGAAAGAAAGCTGGAAGGGATTGATGGTA
GGAAGGATAGTACAACTGATGAAATTGATGGGAGCTTCTGTAACATTTAAAAGTAGAGTC
ATCTTAAAGTACTATCCAGTCTGATTCTAGACACCTTAGAGCATTGCTTTGTCTGCTTTT
AAAGGCAAGTCGTGTAGACAAAGGACAATACGCAAATGTGTACCATTTTGTTTGAGGAAG
AGTTTTCCAAGACAAAGAAACAGTGTCAGAAATAACTGGTGGTAATGCGTTTTTCAACCC
TTTTAGCACGAATCTCCCTGATTTGTTAAAAATATAAAATTACCAGAGATGACCAAAAAT
CTGTGTATGGTCTGAGAAATGTATGGGCAGATTATTTGAAATTGGTTTTGGGGAAAGATT
TGAATTAGATGGTACTGATAGTTATGTGGTAATCAGTTTTCTGCTGAACAGTTGGTACCA
TATTTTTATGGGGGAGTGGGGAATGAAAAGTAACAATTAACAGTTAACACCTTTTGCTTA
ATATGTATCAGGTACTGTTTAAAGCATTTTATACAAATGAACTCATTTAATCTTTACAAT
GTAACCCTATGGAATAGTTACTATTTCATTTTGCAAATGAGGAAGCTGAGCTCAGAACAT
AATATGGGGACTTTTATGCTACTTAAATGTCCAAAAGATGGTTTAGGAATTGTAATTGGA
AGGCTGAATTCTGATATATTTCTATCATTTATGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTACTTCCAGAAATTCAGTTGTTGTAGGAATTTTACAGTTCACTTAATTGGGTTTTCCT
TTGGTGGATGACAACCTTACCTTGGATTTTTAGAAACCTGTGATTCCTGAGTTTTTGCAA
TAAGCAAAATCCTGCAGGTAGGATTGATACTAGATTGAACAGATAATGACTTTAAGACAA
AGAATTGTAGATTTTTGGAATAGATAGAGAACTTTTAAAATGTCTAGTACAAACAACTCA
TTTTACAGATGACAGAAGAGGCTAGGGTAAATTAGTTGCCAAGTTTATGTCTTATTGGTT
CCTGTGAAAAAAAATAATGGTAATCAAAATTCCATTTGAAGTATTTGCTCAATAAAATAA
AATTAGTTCATTATTTGACAGGATTTCAGTTTCTTGAAATCAATGCATAAGTGCAGTTTT
TTTAGCATTTTTCTATTGAAAGGTATTTAGATTTCCAGGGATAAGGAAGTAAAAGAGAAA
GTTTTAATTTTCAAAAATTCATGGATAGGTTCAGAGATGTACAGGTAACTAGAATTGATT
GATTGATGTTCCAGTAAATAAAAAGTGATGTGGAGTTATAGGATCCTTGGCAAGTAAGGA
TTTTAGATGACTATGTGCTTGTAATTTGGAAGGAAAGAAAGCTGGAAGGGATTGATGGTA
GGAAGGATAGTACAACTGATGAAATTGATGGGAGCTTCTGTAACATTTAAAAGTAGAGTC
ATCTTAAAGTACTATCCAGTCTGATTCTAGACACCTTAGAGCATTGCTTTGTCTGCTTTT
AAAGGCAAGTCGTGTAGACAAAGGACAATACGCAAATGTGTACCATTTTGTTTGAGGAAG
AGTTTTCCAAGACAAAGAAACAGTGTCAGAAATAACTGGTGGTAATGCGTTTTTCAACCC
TTTTAGCACGAATCTCCCTGATTTGTTAAAAATATAAAATTACCAGAGATGACCAAAAAT
CTGTGTATGGTCTGAGAAATGTATGGGCAGATTATTTGAAATTGGTTTTGGGGAAAGATT
TGAATTAGATGGTACTGATAGTTATGTGGTAATCAGTTTTCTGCTGAACAGTTGGTACCA
TATTTTTATGGGGGAGTGGGGAATGAAAAGTAACAATTAACAGTTAACACCTTTTGCTTA
ATATGTATCAGGTACTGTTTAAAGCATTTTATACAAATGAACTCATTTAATCTTTACAAT
GTAACCCTATGGAATAGTTACTATTTCATTTTGCAAATGAGGAAGCTGAGCTCAGAACAT
AATATGGGGACTTTTATGCTACTTAAATGTCCAAAAGATGGTTTAGGAATTGTAATTGGA
AGGCTGAATTCTGATATATTTCTATCATTTATGGGG

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               1-1318, gnl|bosTau2|chrX (18584666-18585987)
               

               
               1-1318, gnl|Hg17|chrX (110739267-110741124)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-1318, gnl|bosTau2|chrX (18584666-18585987)
               

               
               1-1318, gnl|Hg17|chrX (110739267-110741124)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               hea (0.204499)
               

               
               ldo (0.0970026)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)
               

               
               ldo (0.0970026)

	1-1318, gnl\|bosTau2\|chrX (18584666-18585987)
	1-1318, gnl\|Hg17\|chrX (110739267-110741124)