Ss1.1-Pig4-TMW8051A07.3
|
CCTGGGCAGACTCAGGAGCGGTGTACTGAGACTGTGATCCAGCTCAGGGTCCGCACGGTT
TCAGAAATTGTCGAACGGTGCTGGCCCCTAGTCTCGCCGTCTTCGCACCTCCCCAGCAAC
TCAGATGCAGAGTGACCTTGGCCGTGGTACAAACCAACCTAGGAACCAGATGAGCAGAGA
CATCTGTGTCCACACCTGGCCGTGTTCCTATTATTTAGAACTTAAGAAGCAATGGGTCCC
TGGAAAGATTTCATTAACTTCTCTCTCACTGAAATTTATGACTGATAAAACTGGAGAAAT
TCTTGTCAACTTTCCCCTTTCCAGTATAATTGAGATCAAGAAAGAGGCTTCTCATTTTAT
ATTCAGTTCTATCACCATCCTGGAAAAGGGTCACATCAAACACTGGTTCAGTTCCTTTCA
GCCTAGTCGAAATGTTGTTTTCAGCATTATCGAGCATTTCTGGAGAGAGTTGCTATTGTC
CCAGTCAGAAGCTGCTATTCAAGGATTACACCGCCCTGTGACCAAGGGGAAGGCGCTGAC
TGATCTTATGGCCTGTTCCCAGAAGCATCTGGAAGATACAGCCAAAGTCCTCCATCATCA
GGGTGAGCAGCTTGACAGCATCTCGAGAGGCCTGGACAAGATGGAATCTGACCTGGATGT
GGCTGACAGGCTGCTAACAGAACTGGAATCTCATTCTTGGTGGCCCTTTAGCTCCAAGCT
TTGGAAGATGCCCTCGGAAACAAAGCCCAGATGGGGTGCCTCAAACACTAGTTCCAAAGC
TTTTGGAAAAGAAGGGATAGTGATCAGAATTCCCTCTATTATTTCGCAAAGAACAGAATC
TCATGTTATACCAGGAAGTCTCACCATGCTTGTTTCTGGATTGGAAATCCACAACTCGGA
TTCTTTGCTCATGCACAAATTTGAAAGAGAAGACATAGATGACATCAAGGTTCACACACC
ATATGAAATTAGCATCCGCCAGCGGTTCATTGGGAAGCCAGACATAGCTTATCATTTGAT
ATCTGCCAAGATGCCAGAGGTTATCCCCATTTTAGAAGTATGGTTCAGCAAGAAGATTGA
GTTGTTAGAAGATGCTTTGGTACTCAGAAGCACTGCAACCTCTTCCCCAGTAGAGAAAGG
GGACTCAGTCTGGCATGCAGCATCTGGGCTGATTGACTGTGCCATGCACCACGAACCATC
CTCAGGGAGCCTGGAAAGCAGTCCACTTCAGCTACAGTCAAGAGAGCCAGTAATTTCTGA
AGGGGACGTCGGGGAACTGAGACAGATCCTGAGGAAGCTAAAGGATCTTGCCTTGGATGC
CAAGACAGAGCTAGAGAGACAGGATGAGGCCTTGGATGGCATCACTGCAGCTGTGGACCG
GACAGCCTTAACCATTGACAAGCATAATCAACGAATGAAAAAACTGACTTAGAAGGACAC
AAAAGCACAGAAGTGACCACTTTTGACAAGAATCACTTCTCTAAAGTACATTGTTCTCAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCTGGGCAGACTCAGGAGCGGTGTACTGAGACTGTGATCCAGCTCAGGGTCCGCACGGTT
TCAGAAATTGTCGAACGGTGCTGGCCCCTAGTCTCGCCGTCTTCGCACCTCCCCAGCAAC
TCAGATGCAGAGTGACCTTGGCCGTGGTACAAACCAACCTAGGAACCAGATGAGCAGAGA
CATCTGTGTCCACACCTGGCCGTGTTCCTATTATTTAGAACTTAAGAAGCAATGGGTCCC
TGGAAAGATTTCATTAACTTCTCTCTCACTGAAATTTATGACTGATAAAACTGGAGAAAT
TCTTGTCAACTTTCCCCTTTCCAGTATAATTGAGATCAAGAAAGAGGCTTCTCATTTTAT
ATTCAGTTCTATCACCATCCTGGAAAAGGGTCACATCAAACACTGGTTCAGTTCCTTTCA
GCCTAGTCGAAATGTTGTTTTCAGCATTATCGAGCATTTCTGGAGAGAGTTGCTATTGTC
CCAGTCAGAAGCTGCTATTCAAGGATTACACCGCCCTGTGACCAAGGGGAAGGCGCTGAC
TGATCTTATGGCCTGTTCCCAGAAGCATCTGGAAGATACAGCCAAAGTCCTCCATCATCA
GGGTGAGCAGCTTGACAGCATCTCGAGAGGCCTGGACAAGATGGAATCTGACCTGGATGT
GGCTGACAGGCTGCTAACAGAACTGGAATCTCATTCTTGGTGGCCCTTTAGCTCCAAGCT
TTGGAAGATGCCCTCGGAAACAAAGCCCAGATGGGGTGCCTCAAACACTAGTTCCAAAGC
TTTTGGAAAAGAAGGGATAGTGATCAGAATTCCCTCTATTATTTCGCAAAGAACAGAATC
TCATGTTATACCAGGAAGTCTCACCATGCTTGTTTCTGGATTGGAAATCCACAACTCGGA
TTCTTTGCTCATGCACAAATTTGAAAGAGAAGACATAGATGACATCAAGGTTCACACACC
ATATGAAATTAGCATCCGCCAGCGGTTCATTGGGAAGCCAGACATAGCTTATCATTTGAT
ATCTGCCAAGATGCCAGAGGTTATCCCCATTTTAGAAGTATGGTTCAGCAAGAAGATTGA
GTTGTTAGAAGATGCTTTGGTACTCAGAAGCACTGCAACCTCTTCCCCAGTAGAGAAAGG
GGACTCAGTCTGGCATGCAGCATCTGGGCTGATTGACTGTGCCATGCACCACGAACCATC
CTCAGGGAGCCTGGAAAGCAGTCCACTTCAGCTACAGTCAAGAGAGCCAGTAATTTCTGA
AGGGGACGTCGGGGAACTGAGACAGATCCTGAGGAAGCTAAAGGATCTTGCCTTGGATGC
CAAGACAGAGCTAGAGAGACAGGATGAGGCCTTGGATGGCATCACTGCAGCTGTGGACCG
GACAGCCTTAACCATTGACAAGCATAATCAACGAATGAAAAAACTGACTTAGAAGGACAC
AAAAGCACAGAAGTGACCACTTTTGACAAGAATCACTTCTCTAAAGTACATTGTTCTCAA |
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gi|57095896|ref|XP_532413.1| |
Protein identifier
|
gi|57095896|ref|XP_532413.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
668-1160, gnl|bosTau2|chr5 (57905504-57905012) |
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668-1160, gnl|Hg17|chr1 (224253429-224253921) |
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668-1160, gnl|Mm7|chr11 (59510360-59509886) |
| |
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1283-1499, gnl|bosTau2|chr5 (57881142-57880929) |
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1283-1499, gnl|canFam2|chr14 (4010648-4010477) |
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1283-1499, gnl|dasNov1|scaffold_76487 (1583-1410) |
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1283-1499, gnl|echTel1|scaffold_284918 (39636-39802) |
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1283-1499, gnl|hg17|chr1 (224274948-224275123) |
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1283-1499, gnl|loxAfr1|scaffold_40149 (6949-7122) |
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1283-1499, gnl|mm7|chr11 (59489371-59489207) |
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1283-1499, gnl|Mm7|chr11 (59489358-59489152) |
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1283-1499, gnl|monDom2|scaffold_5 (80408539-80408384) |
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1283-1499, gnl|oryCun1|scaffold_103432 (4170-4004) |
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1283-1499, gnl|panTro1|chr1 (208046049-208046224) |
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1283-1499, gnl|rheMac2|chr1 (142578573-142578398) |
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1283-1499, gnl|rn3|chr10 (45727090-45726926) |
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1283-1499, gnl|tetNig1|chr15_random (1136594-1136433) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
668-1160, gnl|bosTau2|chr5 (57905504-57905012) |
|
668-1160, gnl|Hg17|chr1 (224253429-224253921) |
|
668-1160, gnl|Mm7|chr11 (59510360-59509886) |
| |
|
1283-1499, gnl|bosTau2|chr5 (57881142-57880929) |
|
1283-1499, gnl|canFam2|chr14 (4010648-4010477) |
|
1283-1499, gnl|dasNov1|scaffold_76487 (1583-1410) |
|
1283-1499, gnl|echTel1|scaffold_284918 (39636-39802) |
|
1283-1499, gnl|hg17|chr1 (224274948-224275123) |
|
1283-1499, gnl|loxAfr1|scaffold_40149 (6949-7122) |
|
1283-1499, gnl|mm7|chr11 (59489371-59489207) |
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1283-1499, gnl|Mm7|chr11 (59489358-59489152) |
|
1283-1499, gnl|monDom2|scaffold_5 (80408539-80408384) |
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1283-1499, gnl|oryCun1|scaffold_103432 (4170-4004) |
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1283-1499, gnl|panTro1|chr1 (208046049-208046224) |
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1283-1499, gnl|rheMac2|chr1 (142578573-142578398) |
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1283-1499, gnl|rn3|chr10 (45727090-45726926) |
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1283-1499, gnl|tetNig1|chr15_random (1136594-1136433) |
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tes (0.207814) |
|
ebs (0.118301) |
|
tes (0.207814) |
|
ebs (0.118301) |
