Non-Coding RNA Search

Ss1.1-Pig4-TMW8051A22.3

Sequence:


               
               TAGGGTTAAGATACAAAGTATTTCTCACAGAAAAACAAGGATTTGCAGTTAACCTGTAAC
AGTGCCACGGACCTAGAAGCACCACGCAAGGGCAGCATTACCCTCGTCCCAGCTGGGGCT
CTGCCATCCGAGGGACCCGCTCTCCATTACCTACCTCCTCCTGTGGCTCCCCCTGCAGGT
GTCTGATCCTTGTCTAGGATGCTTTTTCCATTTATCTGGTGGGGACACCAAACAGGAGTC
CCTTCTGTTCCGTTAACTTTGATGAGTAAGAGGTAGCTGTTCCAGGAAAGACTCCCAAAG
TTTGGGTAGTTCAGGGCTTGCCAGAGGCAACAAGAGTATAGCCACAGGAGCCCCACTCGG
CTCCTCTGTGGCCTCTGCAGCTGGTCTCACCCCCACCCACGTACACGGCGGTTTTATGCG
TGGTCATGGGGTCCACGCCTCGGTCTGTACTTGCACAGGGAGGGTTCATTCTGATTAGGC
TTTCCTCCTGCATGTTGAAGTTCTGTCAGCTTTAAGAGGAGGAGTGGAGTAAATATTCTA
AGTGATGTCATGCACTTTCACTTGTATAAAACATTCTGTGATAGAGACAGTATGCATCGC
CCTTTATATGAGCATTGGATCTTGATCTTGGCCTCCATGTTGTAAATAGGGATTGTATTA
TCTAAAACTGCTGTAGAGAATTCACTTGTGGTGCAATACACTTTTTGATTAAAGCTCTTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGGGTTAAGATACAAAGTATTTCTCACAGAAAAACAAGGATTTGCAGTTAACCTGTAAC
AGTGCCACGGACCTAGAAGCACCACGCAAGGGCAGCATTACCCTCGTCCCAGCTGGGGCT
CTGCCATCCGAGGGACCCGCTCTCCATTACCTACCTCCTCCTGTGGCTCCCCCTGCAGGT
GTCTGATCCTTGTCTAGGATGCTTTTTCCATTTATCTGGTGGGGACACCAAACAGGAGTC
CCTTCTGTTCCGTTAACTTTGATGAGTAAGAGGTAGCTGTTCCAGGAAAGACTCCCAAAG
TTTGGGTAGTTCAGGGCTTGCCAGAGGCAACAAGAGTATAGCCACAGGAGCCCCACTCGG
CTCCTCTGTGGCCTCTGCAGCTGGTCTCACCCCCACCCACGTACACGGCGGTTTTATGCG
TGGTCATGGGGTCCACGCCTCGGTCTGTACTTGCACAGGGAGGGTTCATTCTGATTAGGC
TTTCCTCCTGCATGTTGAAGTTCTGTCAGCTTTAAGAGGAGGAGTGGAGTAAATATTCTA
AGTGATGTCATGCACTTTCACTTGTATAAAACATTCTGTGATAGAGACAGTATGCATCGC
CCTTTATATGAGCATTGGATCTTGATCTTGGCCTCCATGTTGTAAATAGGGATTGTATTA
TCTAAAACTGCTGTAGAGAATTCACTTGTGGTGCAATACACTTTTTGATTAAAGCTCTTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-720, gnl|bosTau2|chr11 (73178548-73177850)
               

               
               11-720, gnl|Hg17|chr9 (124720962-124720213)
               

               
               11-720, gnl|Mm7|chr2 (39024486-39023823)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-720, gnl|bosTau2|chr11 (73178548-73177850)
               

               
               11-720, gnl|Hg17|chr9 (124720962-124720213)
               

               
               11-720, gnl|Mm7|chr2 (39024486-39023823)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               col (0.195008)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               eje (0.0988338)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               che (0.136314)
               

               
               pla (0.133672)
               

               
               eje (0.0988338)

	11-720, gnl\|bosTau2\|chr11 (73178548-73177850)
	11-720, gnl\|Hg17\|chr9 (124720962-124720213)
	11-720, gnl\|Mm7\|chr2 (39024486-39023823)