Ss1.1-Pig4-TMW8051B17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTTGAAATTACATTGGAGCTGTCGTGCTGTAAATATCCTCGAGAAGAGAAGCTTCCAGGC TTCTGGAACGATAACAAAGACTCACTGCTCGAATACATGAAACAAGTGCACATAGGTGTA AAGGGTCAAGTGTTTGATCAGAATGAGACTCCCTTACCCAATGTAATTGTAGAAGTCCAA GACAGAAAACATATTTGCCCTTACAGAACCAACAAATTTGGAGAGTATTACCTCCTTCTC TTGCCTGGGTCCTATGTAATAGAGGTTACCGTCCCTGGACACAACCCACATCTCACAAAG GTGACTATTCCCCCCAAATCCCAGAACTTCAGTGCTCTTAAAAAGGATATTTTACTTCCA TTCAGAGGGCAATTGGATCATATCCCAGAATCAAATCCTTTATGTCCTATGATTCCTCTT TACAGAGATTTGCAAGGCCACTCAGTTGCAACAAAGCCCAGTCTGTTCTTATTTTTAGTG ACTCTTTTTCACATATTGTTCAAATAAAACAAAATGTGAAACTCAACCCCCATCACCACC TGGAATCAGGGATTACTCAAGCCAGGTTGCTGCAACTCTAACTCCCTCTGTGGGACACCT CGACTGGTTAAATGCCACAGTCCTTCCCTAAGAAGAGAAATGGTTGTTTCTAAAACCTGC AACAAGCCACGTATGGTGATAATGGAAGGAATGATTTAGTCTTGATGGAAGACATCTACC CATCAAATACCGCCCACTTACACTTAATCTTGAAGTATTCTTAGAAATTTGTAAGAAGTT AAACTTGAGAAGCAAAAAAGAAGTTCCTGCAAGAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTTGAAATTACATTGGAGCTGTCGTGCTGTAAATATCCTCGAGAAGAGAAGCTTCCAGGC TTCTGGAACGATAACAAAGACTCACTGCTCGAATACATGAAACAAGTGCACATAGGTGTA AAGGGTCAAGTGTTTGATCAGAATGAGACTCCCTTACCCAATGTAATTGTAGAAGTCCAA GACAGAAAACATATTTGCCCTTACAGAACCAACAAATTTGGAGAGTATTACCTCCTTCTC TTGCCTGGGTCCTATGTAATAGAGGTTACCGTCCCTGGACACAACCCACATCTCACAAAG GTGACTATTCCCCCCAAATCCCAGAACTTCAGTGCTCTTAAAAAGGATATTTTACTTCCA TTCAGAGGGCAATTGGATCATATCCCAGAATCAAATCCTTTATGTCCTATGATTCCTCTT TACAGAGATTTGCAAGGCCACTCAGTTGCAACAAAGCCCAGTCTGTTCTTATTTTTAGTG ACTCTTTTTCACATATTGTTCAAATAAAACAAAATGTGAAACTCAACCCCCATCACCACC TGGAATCAGGGATTACTCAAGCCAGGTTGCTGCAACTCTAACTCCCTCTGTGGGACACCT CGACTGGTTAAATGCCACAGTCCTTCCCTAAGAAGAGAAATGGTTGTTTCTAAAACCTGC AACAAGCCACGTATGGTGATAATGGAAGGAATGATTTAGTCTTGATGGAAGACATCTACC CATCAAATACCGCCCACTTACACTTAATCTTGAAGTATTCTTAGAAATTTGTAAGAAGTT AAACTTGAGAAGCAAAAAAGAAGTTCCTGCAAGAAA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-117, gnl|bosTau2|chr5 (29464422-29464306) | |
| 1-117, gnl|canFam2|chr10 (13967970-13968149) | |
| 1-117, gnl|danRer3|chr4 (27032662-27032486) | |
| 1-117, gnl|dasNov1|scaffold_200527 (3724-3902) | |
| 1-117, gnl|echTel1|scaffold_288971 (3554-3375) | |
| 1-117, gnl|fr1|chrUn (250906138-250905974) | |
| 1-117, gnl|galGal2|chr1 (32226868-32227042) | |
| 1-117, gnl|hg17|chr12 (67546937-67547116) | |
| 1-117, gnl|Hg17|chr12 (67547057-67546941) | |
| 1-117, gnl|loxAfr1|scaffold_33205 (42998-42819) | |
| 1-117, gnl|mm7|chr10 (117187469-117187290) | |
| 1-117, gnl|Mm7|chr10 (117187348-117187464) | |
| 1-117, gnl|monDom2|scaffold_169 (682681-682508) | |
| 1-117, gnl|oryCun1|scaffold_107304 (3824-3644) | |
| 1-117, gnl|panTro1|chr10 (69075855-69076034) | |
| 1-117, gnl|rheMac2|chr11 (65855620-65855799) | |
| 1-117, gnl|rn3|chr7 (57001520-57001341) | |
| 1-117, gnl|tetNig1|chrUn_random (30042585-30042409) | |
| 1-117, gnl|xenTro1|scaffold_405 (754047-754226) | |
| 263-813, gnl|bosTau2|chr5 (29451191-29450641) | |
| 263-813, gnl|Hg17|chr12 (67536728-67536171) | |
| 263-813, gnl|Mm7|chr10 (117194646-117195177) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-117, gnl|bosTau2|chr5 (29464422-29464306) | |
| 1-117, gnl|canFam2|chr10 (13967970-13968149) | |
| 1-117, gnl|danRer3|chr4 (27032662-27032486) | |
| 1-117, gnl|dasNov1|scaffold_200527 (3724-3902) | |
| 1-117, gnl|echTel1|scaffold_288971 (3554-3375) | |
| 1-117, gnl|fr1|chrUn (250906138-250905974) | |
| 1-117, gnl|galGal2|chr1 (32226868-32227042) | |
| 1-117, gnl|hg17|chr12 (67546937-67547116) | |
| 1-117, gnl|Hg17|chr12 (67547057-67546941) | |
| 1-117, gnl|loxAfr1|scaffold_33205 (42998-42819) | |
| 1-117, gnl|mm7|chr10 (117187469-117187290) | |
| 1-117, gnl|Mm7|chr10 (117187348-117187464) | |
| 1-117, gnl|monDom2|scaffold_169 (682681-682508) | |
| 1-117, gnl|oryCun1|scaffold_107304 (3824-3644) | |
| 1-117, gnl|panTro1|chr10 (69075855-69076034) | |
| 1-117, gnl|rheMac2|chr11 (65855620-65855799) | |
| 1-117, gnl|rn3|chr7 (57001520-57001341) | |
| 1-117, gnl|tetNig1|chrUn_random (30042585-30042409) | |
| 1-117, gnl|xenTro1|scaffold_405 (754047-754226) | |
| 263-813, gnl|bosTau2|chr5 (29451191-29450641) | |
| 263-813, gnl|Hg17|chr12 (67536728-67536171) | |
| 263-813, gnl|Mm7|chr10 (117194646-117195177) |
| Expressed library(ies): 6 entry(ies) | More info |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
| amn (0.417711) | |
| pan (0.23596) | |
| ton (0.1755) | |
| liv (0.146284) | |
| pgl (0.118483) | |
| spc (0.113366) |
| Expressed library(ies): 6 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| amn (0.417711) | |
| pan (0.23596) | |
| ton (0.1755) | |
| liv (0.146284) | |
| pgl (0.118483) | |
| spc (0.113366) |