Ss1.1-Pig4-TMW8052E16.3
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGTAGTGTTGCAAGTGTTTGTGGGCAACGATTCTGGTCGAGTGAAGCCACATGGATTTTA TCAGGCCTGCAGGGTAACTGGGCGAAATACAACTCCCTGCAAAGAAGTAGACATCGAAGG CACGACTGTTATAGAAGTTGGCCTTGATCCAAGCAACAATATGACACTGGCGGTGGACTG TGTGGGGATATTGAAGTTGAGGAATGCTGACGTTGAAGCCAGAATAGGAATTGCTGGTTC CAAGAAAAAAAGCACTCGTGCCAGATTGGTTTTTCGAGTAAATATCACAAGGAAAGATGG CTCTACTTTGACACTGCAAACACCTTCCTCTCCAATTTTATGTACTCAGCCAGCAGGAGT GCCAGAGATCTTAAAGAAGAGCTTACATAGCTGTTCAGTGAAAGGAGAGGAAGAAGTATT TTTAATTGGCAAGAACTTTCTGAAAGGAACTAAAGTTATTTTCCAGGAAAATGTTTCTGA TGAAAACTCTTGGAAGTCAGAAGCTGAAATCGACATGGAATTATTTCATCAGAATCATCT TATTGTGAAGGTTCCCCCATATCATGACCAACATATAACTTTGCCAGTATCAGTGGGAAT ATATGTAGTGACCAATGCTGGAAGATCTCATGATGTTCAGCCATTCACTTACACTCCAGA CCCAGCAGCTGCTGCTTTGAATATAAATGTGAAGAAGGAAATATCTAGAGCCCGCCGGCG TTGCTCTTTTGAAGAGGCCATGAAAGCAATGAAAACTACTGGATGTAACTTAGATAAGGT GATGCTTCCTAATGCTCTGATCAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGTAGTGTTGCAAGTGTTTGTGGGCAACGATTCTGGTCGAGTGAAGCCACATGGATTTTA TCAGGCCTGCAGGGTAACTGGGCGAAATACAACTCCCTGCAAAGAAGTAGACATCGAAGG CACGACTGTTATAGAAGTTGGCCTTGATCCAAGCAACAATATGACACTGGCGGTGGACTG TGTGGGGATATTGAAGTTGAGGAATGCTGACGTTGAAGCCAGAATAGGAATTGCTGGTTC CAAGAAAAAAAGCACTCGTGCCAGATTGGTTTTTCGAGTAAATATCACAAGGAAAGATGG CTCTACTTTGACACTGCAAACACCTTCCTCTCCAATTTTATGTACTCAGCCAGCAGGAGT GCCAGAGATCTTAAAGAAGAGCTTACATAGCTGTTCAGTGAAAGGAGAGGAAGAAGTATT TTTAATTGGCAAGAACTTTCTGAAAGGAACTAAAGTTATTTTCCAGGAAAATGTTTCTGA TGAAAACTCTTGGAAGTCAGAAGCTGAAATCGACATGGAATTATTTCATCAGAATCATCT TATTGTGAAGGTTCCCCCATATCATGACCAACATATAACTTTGCCAGTATCAGTGGGAAT ATATGTAGTGACCAATGCTGGAAGATCTCATGATGTTCAGCCATTCACTTACACTCCAGA CCCAGCAGCTGCTGCTTTGAATATAAATGTGAAGAAGGAAATATCTAGAGCCCGCCGGCG TTGCTCTTTTGAAGAGGCCATGAAAGCAATGAAAACTACTGGATGTAACTTAGATAAGGT GATGCTTCCTAATGCTCTGATCAC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | More info |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
| 172-349, gnl|bosTau2|chr18 (30282767-30282944) | |
| 172-349, gnl|canFam2|chr5 (83047239-83047040) | |
| 172-349, gnl|danRer3|chrUn (183752515-183752335) | |
| 172-349, gnl|dasNov1|scaffold_143568 (4436-4236) | |
| 172-349, gnl|echTel1|scaffold_238409 (4358-4158) | |
| 172-349, gnl|fr1|chrUn (73695919-73696117) | |
| 172-349, gnl|galGal2|chr11_random (196465-196677) | |
| 172-349, gnl|hg17|chr16 (68251111-68251311) | |
| 172-349, gnl|Hg17|chr16 (68251131-68251308) | |
| 172-349, gnl|loxAfr1|scaffold_212899 (931-1128) | |
| 172-349, gnl|mm7|chr8 (105951552-105951750) | |
| 172-349, gnl|Mm7|chr8 (105951570-105951747) | |
| 172-349, gnl|monDom2|scaffold_23 (4519930-4519727) | |
| 172-349, gnl|panTro1|chr18 (62600666-62600867) | |
| 172-349, gnl|rheMac2|chr20 (68043804-68044003) | |
| 172-349, gnl|rn3|chr19 (37220845-37221043) | |
| 172-349, gnl|tetNig1|chr5 (6079687-6079508) | |
| 172-349, gnl|xenTro1|scaffold_578 (389858-390071) | |
| 521-665, gnl|bosTau2|chr18 (30298344-30298489) | |
| 521-665, gnl|canFam2|chr5 (83027149-83026968) | |
| 521-665, gnl|danRer3|chrUn (183751419-183751246) | |
| 521-665, gnl|fr1|chrUn (73696678-73696855) | |
| 521-665, gnl|galGal2|chr11_random (200524-200703) | |
| 521-665, gnl|hg17|chr16 (68268566-68268746) | |
| 521-665, gnl|Hg17|chr16 (68268594-68268739) | |
| 521-665, gnl|mm7|chr8 (105958736-105958916) | |
| 521-665, gnl|Mm7|chr8 (105958765-105958909) | |
| 521-665, gnl|monDom2|scaffold_23 (4508680-4508475) | |
| 521-665, gnl|panTro1|chr18 (62618144-62618324) | |
| 521-665, gnl|rheMac2|chr20 (68060173-68060353) | |
| 521-665, gnl|rn3|chr19 (37225177-37225357) | |
| 521-665, gnl|tetNig1|chr13 (4309410-4309566) | |
| 521-665, gnl|xenTro1|scaffold_578 (395794-395964) |
| Aligned organism(s): 33 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 172-349, gnl|bosTau2|chr18 (30282767-30282944) | |
| 172-349, gnl|canFam2|chr5 (83047239-83047040) | |
| 172-349, gnl|danRer3|chrUn (183752515-183752335) | |
| 172-349, gnl|dasNov1|scaffold_143568 (4436-4236) | |
| 172-349, gnl|echTel1|scaffold_238409 (4358-4158) | |
| 172-349, gnl|fr1|chrUn (73695919-73696117) | |
| 172-349, gnl|galGal2|chr11_random (196465-196677) | |
| 172-349, gnl|hg17|chr16 (68251111-68251311) | |
| 172-349, gnl|Hg17|chr16 (68251131-68251308) | |
| 172-349, gnl|loxAfr1|scaffold_212899 (931-1128) | |
| 172-349, gnl|mm7|chr8 (105951552-105951750) | |
| 172-349, gnl|Mm7|chr8 (105951570-105951747) | |
| 172-349, gnl|monDom2|scaffold_23 (4519930-4519727) | |
| 172-349, gnl|panTro1|chr18 (62600666-62600867) | |
| 172-349, gnl|rheMac2|chr20 (68043804-68044003) | |
| 172-349, gnl|rn3|chr19 (37220845-37221043) | |
| 172-349, gnl|tetNig1|chr5 (6079687-6079508) | |
| 172-349, gnl|xenTro1|scaffold_578 (389858-390071) | |
| 521-665, gnl|bosTau2|chr18 (30298344-30298489) | |
| 521-665, gnl|canFam2|chr5 (83027149-83026968) | |
| 521-665, gnl|danRer3|chrUn (183751419-183751246) | |
| 521-665, gnl|fr1|chrUn (73696678-73696855) | |
| 521-665, gnl|galGal2|chr11_random (200524-200703) | |
| 521-665, gnl|hg17|chr16 (68268566-68268746) | |
| 521-665, gnl|Hg17|chr16 (68268594-68268739) | |
| 521-665, gnl|mm7|chr8 (105958736-105958916) | |
| 521-665, gnl|Mm7|chr8 (105958765-105958909) | |
| 521-665, gnl|monDom2|scaffold_23 (4508680-4508475) | |
| 521-665, gnl|panTro1|chr18 (62618144-62618324) | |
| 521-665, gnl|rheMac2|chr20 (68060173-68060353) | |
| 521-665, gnl|rn3|chr19 (37225177-37225357) | |
| 521-665, gnl|tetNig1|chr13 (4309410-4309566) | |
| 521-665, gnl|xenTro1|scaffold_578 (395794-395964) |
| Expressed library(ies): 2 entry(ies) | More info |
| Expressed library(ies): 2 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nmm (0.132802) | |
| jca (0.11396) |