Non-Coding RNA Search

Ss1.1-Pig4-TMW8052F08.5

Sequence:


               
               AAGTGGGGCAATACCCATCCGCCAAGGGAATCCGTACATTTCTGCAGCGGTGATGGAGCT
TGGTTTGAGCAGATCTCCCTTTGCTAGAACAGAAGATGCCCTATCGCGATCTTTCCAGAT
TTGAAATAAGATCTTTGAGCCAGGAGGAGATTCTTCCGTTTTTTTTTTTTGTTTGTTTGT
TTTTTTTTTTGGATGGCAGTCGATATAAAATGCCACCCATCTGCAGTTAATCTCTTTCCA
TCATCCTGTGATTAAAAGCGGTGATTCAGTGGGAACTTGGAGCAGTTTTAGCTGGAGGGG
GAAGACTGCCTACGCTGGGCACTATTTTAGGGTCTCATCATTTCAATTCCAAATAGGTTC
AGATAGCCTCAGCTAATCCGCTAGGATATGTGAGTGGGAGAGCTGACACGGCAACTTTTC
AGCAGGTAAAAACCTTGCTTCAAGGGAAACTGATACTGAGCTACTGACATAATCCCAAAT
GACCTGCTGTGATATAACTCCCCAAATGCCAAATCCTGATTTCTGAATTCATAAGTAATT
CGAGGTAACCTTACTTAGTAGGATTCTGTGTGAGAAAATGATGTTAAGATTTGCCTCCTT
CTTACCACTAATCCCAAGAGTCCAGAACAGCCCCTCTCTAACTTTTTAAATGAACATAAT
TTAAATTAACTCCCTCCTCCTGACTCACCCACATCTCCCTGAGTTTATTTCCACATTTTG
AAGAACTGGAGTTCCCTGGTGGCTCAGCAGGTTAAAGATCCAGCGTTGTCACGGCTGTGG
CTTGGGTTCATCCCTGGTCTGGGAAGTTTTGGCACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTGGGGCAATACCCATCCGCCAAGGGAATCCGTACATTTCTGCAGCGGTGATGGAGCT
TGGTTTGAGCAGATCTCCCTTTGCTAGAACAGAAGATGCCCTATCGCGATCTTTCCAGAT
TTGAAATAAGATCTTTGAGCCAGGAGGAGATTCTTCCGTTTTTTTTTTTTGTTTGTTTGT
TTTTTTTTTTGGATGGCAGTCGATATAAAATGCCACCCATCTGCAGTTAATCTCTTTCCA
TCATCCTGTGATTAAAAGCGGTGATTCAGTGGGAACTTGGAGCAGTTTTAGCTGGAGGGG
GAAGACTGCCTACGCTGGGCACTATTTTAGGGTCTCATCATTTCAATTCCAAATAGGTTC
AGATAGCCTCAGCTAATCCGCTAGGATATGTGAGTGGGAGAGCTGACACGGCAACTTTTC
AGCAGGTAAAAACCTTGCTTCAAGGGAAACTGATACTGAGCTACTGACATAATCCCAAAT
GACCTGCTGTGATATAACTCCCCAAATGCCAAATCCTGATTTCTGAATTCATAAGTAATT
CGAGGTAACCTTACTTAGTAGGATTCTGTGTGAGAAAATGATGTTAAGATTTGCCTCCTT
CTTACCACTAATCCCAAGAGTCCAGAACAGCCCCTCTCTAACTTTTTAAATGAACATAAT
TTAAATTAACTCCCTCCTCCTGACTCACCCACATCTCCCTGAGTTTATTTCCACATTTTG
AAGAACTGGAGTTCCCTGGTGGCTCAGCAGGTTAAAGATCCAGCGTTGTCACGGCTGTGG
CTTGGGTTCATCCCTGGTCTGGGAAGTTTTGGCACA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-718, gnl|bosTau2|chr26 (23907781-23907040)
               

               
               1-718, gnl|Hg17|chr10 (118424023-118423304)
               

               
               1-718, gnl|Mm7|chr19 (58721325-58720370)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-718, gnl|bosTau2|chr26 (23907781-23907040)
               

               
               1-718, gnl|Hg17|chr10 (118424023-118423304)
               

               
               1-718, gnl|Mm7|chr19 (58721325-58720370)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               tes (0.207814)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               tes (0.207814)

	1-718, gnl\|bosTau2\|chr26 (23907781-23907040)
	1-718, gnl\|Hg17\|chr10 (118424023-118423304)
	1-718, gnl\|Mm7\|chr19 (58721325-58720370)