Ss1.1-Pig4-TMW8052F09.5
|
GGTGGAAGAAGCCCGTCGCCTCCAGGGATCTGGCCCCAGCCCCCTCTGTGTCCACTGCAG
TGCCGGCTGTGGGCGAACAGGTGTCCTGTGCATTGTGGACTATGTGAGGCAGTTGCTCCT
GACCCAGATGATCCCACCTGACTTCAGCCTCTTCAATGTGGTCCTCAACATTCGGAGGCA
GCGGCCATCTGCTGTGCAGACAGAGGAGCAGTACAGGTTCCTGTACCACACAGTGGCTCA
GATGTTCCTTGCAGCCCTTCAAAACGCCAGCCCTCACTACCAGAACCTCAAGGAGAACTG
TGCCCCGCTCTACGATGATGCCCTCTCCCTCCGGACTTCCCAGACCCTTTCTGCCATGGC
CCGCCCATCCGGCGGGGTCCTCAGGAGCATCTCGGTGCCCGGGCCCCCGGCCCTCGCCAT
GGCCGACACGTACGCCGTGGTGCAAAAGCGCGCGGCTCCCGCGGGCACCGGGGCCGGGGC
GGGCTCGCGGGCGCGCGGCGAGGAGGAGGCGCCGCTCTACAGCCAGGTGATGTCACGCGC
CCGGCGGCCGCAGGCGCACGCGGAGGACGCGCGCGGGGCGCTACCGGGCCGCGTTACTGC
TGACCAAAACCCTGATGGGCCCGGCGCCTATGAGGACGTGGGGAATGGAGCGCAGACCAC
TGGATTAGGCTTCAACCTGCGTATTGGAAGGCCTAAAGGACCCCGGGACCCCCCTGCCGA
GTGGACCCGGGTGTGAGTGCTGCACCCCTGCCTGCCTATTGCTCCATAGAAGTGCCCGGA
CTGCTGAGGGCTCTGCTCTGCTCTTTGCAGTGTTGGGAATGGAAATGATGGGCTGAATCA
AAATAAAAGTTTTCTCCCTGTTGGAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGTGGAAGAAGCCCGTCGCCTCCAGGGATCTGGCCCCAGCCCCCTCTGTGTCCACTGCAG
TGCCGGCTGTGGGCGAACAGGTGTCCTGTGCATTGTGGACTATGTGAGGCAGTTGCTCCT
GACCCAGATGATCCCACCTGACTTCAGCCTCTTCAATGTGGTCCTCAACATTCGGAGGCA
GCGGCCATCTGCTGTGCAGACAGAGGAGCAGTACAGGTTCCTGTACCACACAGTGGCTCA
GATGTTCCTTGCAGCCCTTCAAAACGCCAGCCCTCACTACCAGAACCTCAAGGAGAACTG
TGCCCCGCTCTACGATGATGCCCTCTCCCTCCGGACTTCCCAGACCCTTTCTGCCATGGC
CCGCCCATCCGGCGGGGTCCTCAGGAGCATCTCGGTGCCCGGGCCCCCGGCCCTCGCCAT
GGCCGACACGTACGCCGTGGTGCAAAAGCGCGCGGCTCCCGCGGGCACCGGGGCCGGGGC
GGGCTCGCGGGCGCGCGGCGAGGAGGAGGCGCCGCTCTACAGCCAGGTGATGTCACGCGC
CCGGCGGCCGCAGGCGCACGCGGAGGACGCGCGCGGGGCGCTACCGGGCCGCGTTACTGC
TGACCAAAACCCTGATGGGCCCGGCGCCTATGAGGACGTGGGGAATGGAGCGCAGACCAC
TGGATTAGGCTTCAACCTGCGTATTGGAAGGCCTAAAGGACCCCGGGACCCCCCTGCCGA
GTGGACCCGGGTGTGAGTGCTGCACCCCTGCCTGCCTATTGCTCCATAGAAGTGCCCGGA
CTGCTGAGGGCTCTGCTCTGCTCTTTGCAGTGTTGGGAATGGAAATGATGGGCTGAATCA
AAATAAAAGTTTTCTCCCTGTTGGAAAAAAAAAAAAAAAAAAAAAAAA
|
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gi|31127083|gb|AAH52800.1| |
Protein identifier
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gi|31127083|gb|AAH52800.1| |
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379-596, gnl|bosTau2|chr2 (554423-554640) |
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379-596, gnl|Hg17|chr2 (130846054-130846289) |
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379-596, gnl|Mm7|chr1 (34695981-34696195) |
| |
|
667-852, gnl|bosTau2|chr2 (555321-555506) |
|
667-852, gnl|canFam2|chr25 (21978516-21978347) |
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667-852, gnl|dasNov1|scaffold_64871 (708-539) |
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667-852, gnl|echTel1|scaffold_292096 (111224-111041) |
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667-852, gnl|hg17|chr2 (130846954-130847123) |
|
667-852, gnl|Hg17|chr2 (130846958-130847142) |
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667-852, gnl|loxAfr1|scaffold_215425 (311-488) |
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667-852, gnl|mm7|chr1 (34696797-34696972) |
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667-852, gnl|Mm7|chr1 (34696801-34696991) |
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667-852, gnl|oryCun1|scaffold_198054 (17755-17591) |
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667-852, gnl|panTro1|chr13 (17004423-17004591) |
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667-852, gnl|rheMac2|chr13 (136766302-136766446) |
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667-852, gnl|rn3|chr9 (33215811-33215986) |
|
667-852, gnl|tetNig1|chrUn_random (97026306-97026154) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
379-596, gnl|bosTau2|chr2 (554423-554640) |
|
379-596, gnl|Hg17|chr2 (130846054-130846289) |
|
379-596, gnl|Mm7|chr1 (34695981-34696195) |
| |
|
667-852, gnl|bosTau2|chr2 (555321-555506) |
|
667-852, gnl|canFam2|chr25 (21978516-21978347) |
|
667-852, gnl|dasNov1|scaffold_64871 (708-539) |
|
667-852, gnl|echTel1|scaffold_292096 (111224-111041) |
|
667-852, gnl|hg17|chr2 (130846954-130847123) |
|
667-852, gnl|Hg17|chr2 (130846958-130847142) |
|
667-852, gnl|loxAfr1|scaffold_215425 (311-488) |
|
667-852, gnl|mm7|chr1 (34696797-34696972) |
|
667-852, gnl|Mm7|chr1 (34696801-34696991) |
|
667-852, gnl|oryCun1|scaffold_198054 (17755-17591) |
|
667-852, gnl|panTro1|chr13 (17004423-17004591) |
|
667-852, gnl|rheMac2|chr13 (136766302-136766446) |
|
667-852, gnl|rn3|chr9 (33215811-33215986) |
|
667-852, gnl|tetNig1|chrUn_random (97026306-97026154) |
|
ill (0.351185) |
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cag (0.302389) |
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pla (0.267344) |
|
ece (0.229305) |
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fcc (0.197785) |
|
eje (0.197668) |
|
fbs (0.175346) |
|
nca (0.136874) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
nbm (0.0993246) |
|
ill (0.351185) |
|
cag (0.302389) |
|
pla (0.267344) |
|
ece (0.229305) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
fbs (0.175346) |
|
nca (0.136874) |
|
cly (0.120642) |
|
ebs (0.118301) |
|
med (0.116252) |
|
jca (0.11396) |
|
nbm (0.0993246) |
