Non-Coding RNA Search

Ss1.1-Pig4-TMW8052F21.5

Sequence:


               
               CCCCTGCCTGCTTTGTCCTTTAACTGGAGATCGGGCCCTGGGGCTGTCCAGCACTCTAAG
ACTGGCTTCAGACCAGAGAATTATCTTGACCTGATGGAAAATTCGGGGGCTAGGTCTTTG
GTCCGGTCCAGTTCTCGTGTAATCGGGTCTAGCTGATGTTAGAACCTGGACCTGGATCCA
GGGCCCGGTGGGTGTCTGGAGTTAACTTCAGCCTGTGGAATGTCTCCATACAGAAAACGA
GGCTGTGCGTTGATTTGCTCGAAGACTCTTTCCCTCCAAAGTTAAGTTTCAGATGATTCA
TGAAACGTTCGGCCTGGCGAAATCATTTGTAAAATCTCGTTCACTGGTGAATCACACTGG
GGTTTGCCATTGATCTGGTCCGCTTGGTATGTCGCAGAGAATTTCATAGTATTGTTATTT
TTCAAGGTCTGAATGAATGTTCCCTTGGCTTCAGCTGATGTTTTTCAAGTTTCCTTTGTA
GACCGACCTTCTGAAAAAGAATCCCAAATGCCTGAAAGTTTTCTTTAAAAAAGAAAAAAG
AAAAACTGTTTAGACCGTTATCTATAAATATACCGTATTTTTAATTTTGTGTAATTGTAC
ATTTCATGAAAGGCTGTCAGCTTCAAAGAGGAAGCGAAGAGGAGCTAACACATGTCTAGA
AAGAATTGTCTCATTAAAGAATGTGGATCTATTGAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCCTGCCTGCTTTGTCCTTTAACTGGAGATCGGGCCCTGGGGCTGTCCAGCACTCTAAG
ACTGGCTTCAGACCAGAGAATTATCTTGACCTGATGGAAAATTCGGGGGCTAGGTCTTTG
GTCCGGTCCAGTTCTCGTGTAATCGGGTCTAGCTGATGTTAGAACCTGGACCTGGATCCA
GGGCCCGGTGGGTGTCTGGAGTTAACTTCAGCCTGTGGAATGTCTCCATACAGAAAACGA
GGCTGTGCGTTGATTTGCTCGAAGACTCTTTCCCTCCAAAGTTAAGTTTCAGATGATTCA
TGAAACGTTCGGCCTGGCGAAATCATTTGTAAAATCTCGTTCACTGGTGAATCACACTGG
GGTTTGCCATTGATCTGGTCCGCTTGGTATGTCGCAGAGAATTTCATAGTATTGTTATTT
TTCAAGGTCTGAATGAATGTTCCCTTGGCTTCAGCTGATGTTTTTCAAGTTTCCTTTGTA
GACCGACCTTCTGAAAAAGAATCCCAAATGCCTGAAAGTTTTCTTTAAAAAAGAAAAAAG
AAAAACTGTTTAGACCGTTATCTATAAATATACCGTATTTTTAATTTTGTGTAATTGTAC
ATTTCATGAAAGGCTGTCAGCTTCAAAGAGGAAGCGAAGAGGAGCTAACACATGTCTAGA
AAGAATTGTCTCATTAAAGAATGTGGATCTATTGAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               36-692, gnl|bosTau2|chr26 (7761116-7760461)
               

               
               36-692, gnl|Hg17|chr10 (98115282-98114354)
               

               
               36-692, gnl|Mm7|chr19 (40975406-40974786)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-692, gnl|bosTau2|chr26 (7761116-7760461)
               

               
               36-692, gnl|Hg17|chr10 (98115282-98114354)
               

               
               36-692, gnl|Mm7|chr19 (40975406-40974786)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               hyp (0.142837)
               

               
               spc (0.113366)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)
               

               
               spc (0.113366)

	36-692, gnl\|bosTau2\|chr26 (7761116-7760461)
	36-692, gnl\|Hg17\|chr10 (98115282-98114354)
	36-692, gnl\|Mm7\|chr19 (40975406-40974786)