Non-Coding RNA Search

Ss1.1-Pig4-TMW8052G17.5

Sequence:


               
               GAATAAAGAAAGAAAAGGAAGAGGCAGCTAGAAAACGGCAGGAAGAACAAGAGAGAAAGT
TAAAGGAAGAATGGGAAGAACAGCAGAGAAAAGAGAGAGAAGAGGAACAGCAGAAGCTAC
AGGAGAAGAAAGAAAGAGAGGAAGCTGTGCAGAAGATGCTGGAGCAGGCTGAAAATGAGC
TGGAAAACGGTGCCACATGGCAAAACCCAGAACCACCCACGGAATTAAGAATAATGGAGA
AAGATCGAGCTAACTGTCCATTCTACAGTAAAACGGGAGCTTGCAGATTCGGAGATAGGT
AACCGACTTTGCTTTCTCACGTCCGAGTTGAGTGACCCCTTCTTATTAAAAGCATGTTTA
CGACATTTGGAATGGAGCAGTGCAGAAGGGACGACTGTTCACAGTCAGGCACCTGCTGCG
TTCGTGCTGCTGATCTCGTTCCCCAGCTGACTGGCTCCTGCTCCCCCTGTGCCTCTTCCC
TGGGTGGGCTTGTCCACTTCTCTGGCAAGGCTGCCTGTGCATTCCTTCCACAGCTGTCTG
AAGACTTTTTGCTTTAGTTTCCCTCCTGTGCCTGTATTAGCCCCACATGGGACAACCGGG
ATAGAGAATCTCTTCCAAAAGACTGGCGCAGCCTGGCTTTAGTTTTTGAATGGCAAGCAC
TGGGCACAAAAGAGGCTTTAATAACTGGCATGTCCAAAGGGAAATCTGTGAAAGACAGGA
TCTGAGGGAGTAGAGGAAAAGTCTTTTTTTTTTTTCCCTTCTTTTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAATAAAGAAAGAAAAGGAAGAGGCAGCTAGAAAACGGCAGGAAGAACAAGAGAGAAAGT
TAAAGGAAGAATGGGAAGAACAGCAGAGAAAAGAGAGAGAAGAGGAACAGCAGAAGCTAC
AGGAGAAGAAAGAAAGAGAGGAAGCTGTGCAGAAGATGCTGGAGCAGGCTGAAAATGAGC
TGGAAAACGGTGCCACATGGCAAAACCCAGAACCACCCACGGAATTAAGAATAATGGAGA
AAGATCGAGCTAACTGTCCATTCTACAGTAAAACGGGAGCTTGCAGATTCGGAGATAGGT
AACCGACTTTGCTTTCTCACGTCCGAGTTGAGTGACCCCTTCTTATTAAAAGCATGTTTA
CGACATTTGGAATGGAGCAGTGCAGAAGGGACGACTGTTCACAGTCAGGCACCTGCTGCG
TTCGTGCTGCTGATCTCGTTCCCCAGCTGACTGGCTCCTGCTCCCCCTGTGCCTCTTCCC
TGGGTGGGCTTGTCCACTTCTCTGGCAAGGCTGCCTGTGCATTCCTTCCACAGCTGTCTG
AAGACTTTTTGCTTTAGTTTCCCTCCTGTGCCTGTATTAGCCCCACATGGGACAACCGGG
ATAGAGAATCTCTTCCAAAAGACTGGCGCAGCCTGGCTTTAGTTTTTGAATGGCAAGCAC
TGGGCACAAAAGAGGCTTTAATAACTGGCATGTCCAAAGGGAAATCTGTGAAAGACAGGA
TCTGAGGGAGTAGAGGAAAAGTCTTTTTTTTTTTTCCCTTCTTTTTTT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               178-744, gnl|bosTau2|chrX (39894793-39895373)
               

               
               178-744, gnl|Hg17|chrX (15586978-15587676)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               178-744, gnl|bosTau2|chrX (39894793-39895373)
               

               
               178-744, gnl|Hg17|chrX (15586978-15587676)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ldo (0.0970026)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ldo (0.0970026)

	178-744, gnl\|bosTau2\|chrX (39894793-39895373)
	178-744, gnl\|Hg17\|chrX (15586978-15587676)