Non-Coding RNA Search

Ss1.1-Pig4-TMW8053A04.5

Sequence:


               
               ACAACAGGAACTCCTAACCCATGATTTAAATGTCCTGGCTATTTTTCTTTTAGAGCCCAG
ACACAAAAGCAAATGCATTTTGAAAGTTGTTTTTGTTTTTATTGGTTTATTGTTTGATTA
TCCACTCTAAAAAAAACCCAGAAAACTTCAAATATAAAATGTATTTTCAAATTATTGAAT
GTTCCATCCATCCCAGTATGTGAAATTCTCCTGTGAATAAATGTGTATAGTCTTTATACA
GCTTGAGCTTTGTAGCCTGAAATGTTTTCAGGGAGAAACTCTTTCAATAAAATAGGGAAT
GTCTATTCTCCCTTGGAGTTTTTTTACTTTCTCATCACAATACACAGTTGTTTGGGAGTG
GTTGCTCAATGAAAACATACTGGCATTTGTGTTGAATATTTTGTATATTTTGTTTTCCCA
CTTATGGCTTCTGAGAATTCTTGCCAAGTACTGACTTTCTCAGAGGCTGGCGACCACCCC
TCCCTGAGCTGTGCATCCGTGTTTCCTTTTTTTTTTTTAAATGAGGAGGGAAGGAGGCAG
CCCTAACCATCAAAAGCCGATTTCTGGATTCTTTACTACAGAGGTTTTAGGGTAAAGGCA
TTTCATGTAAACTTAAATCGATAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAACAGGAACTCCTAACCCATGATTTAAATGTCCTGGCTATTTTTCTTTTAGAGCCCAG
ACACAAAAGCAAATGCATTTTGAAAGTTGTTTTTGTTTTTATTGGTTTATTGTTTGATTA
TCCACTCTAAAAAAAACCCAGAAAACTTCAAATATAAAATGTATTTTCAAATTATTGAAT
GTTCCATCCATCCCAGTATGTGAAATTCTCCTGTGAATAAATGTGTATAGTCTTTATACA
GCTTGAGCTTTGTAGCCTGAAATGTTTTCAGGGAGAAACTCTTTCAATAAAATAGGGAAT
GTCTATTCTCCCTTGGAGTTTTTTTACTTTCTCATCACAATACACAGTTGTTTGGGAGTG
GTTGCTCAATGAAAACATACTGGCATTTGTGTTGAATATTTTGTATATTTTGTTTTCCCA
CTTATGGCTTCTGAGAATTCTTGCCAAGTACTGACTTTCTCAGAGGCTGGCGACCACCCC
TCCCTGAGCTGTGCATCCGTGTTTCCTTTTTTTTTTTTAAATGAGGAGGGAAGGAGGCAG
CCCTAACCATCAAAAGCCGATTTCTGGATTCTTTACTACAGAGGTTTTAGGGTAAAGGCA
TTTCATGTAAACTTAAATCGATAT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               19-619, gnl|bosTau2|chr18 (1759085-1759660)
               

               
               19-619, gnl|Hg17|chr16 (74036322-74035149)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               19-619, gnl|bosTau2|chr18 (1759085-1759660)
               

               
               19-619, gnl|Hg17|chr16 (74036322-74035149)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               pgl (0.236967)
               

               
               nmm (0.132802)
               

               
               clu (0.119646)

Expressed library(ies): 3 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.236967)
               

               
               nmm (0.132802)
               

               
               clu (0.119646)

	19-619, gnl\|bosTau2\|chr18 (1759085-1759660)
	19-619, gnl\|Hg17\|chr16 (74036322-74035149)