Ss1.1-Pig4-TMW8053A20.5
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GAGCCCAGAGCCGGCTGCTGGTCCCCCGGGGACGGCGGGCAGGAGCCCTGGCAAAGAGCT
CCCCTGCAGACACAGTGGTGGAGGAGCTGGTGCTCAGGGCCGCGGCGGCCCCGCTCATGG
AGAGGCACGCGCGTGGGGGCATGGCCGTGGCGGCGAGCGTGCACACGGAGGCCTGGCCAC
ATATCACCTCATTTTTAAGAATCAATCACAAGGTGCCAAGGAGGTTTTATTTCCTTTTTT
AAAAGATGACAAATGTACAGATATTAATATATTTTTGGTGCCGATGGCAACTATTTTTAA
GAGAGGATGGAGCTGGCTTTTCTCCTCCCCACGCAGTTCTATTTATCCTGGACATTTCAC
CCCTCCTCTGTGCCTTGGCGCTGGGGTGGCTGCCCTGACCCCACCCTTCATGCCTCCTGA
AGGGTTTCACCTACTCACTCGCAGGGTCATCCAGGTGTTGGGTGGGGTCTGACCAGGAGG
TGAGGCGGGCCCGGGAGTGTCCTGCCATCACTCTTCCCTCTGGGGCGCCGAGTGCAGGCG
GGGTGGCCGGGCTCCAACTTTTGGGAGCCTCGCTCACACTATCCGATACCGAGAGACAGA
AGGTAGAGCTTCCTGTTTGTCTCCACCCTTGGGGAGGCCGAGGTTCATCCATTGCGGCTG
CGGGGCTGAGCCAGATGGGATGGTGTGGCTTCCTCGTGCCCAGTGCCTGCAGTGCTAGGC
ATGCAGGGCCAGGCTGCAAGGCTTCCTCTTTTCCTGGCTGAGTCAAAAATCCTAGGACAG
GAGCAAAAAATTGGGACAGAATAAGAGCCAGACACATCAGAAGCCTTTAGAGGGAGAACA
GTATTCGAGGGCTGACAAGTTATAGTTGGAGCCTTTCTTCTGACTGATTTTCAAAGGGCC
AGGCTGGGGCCTGGGCTCCTAAGGAGGGACCCACCCCTGAGCCAGTCGGCTCCATCTTCG
GGCCTCGGCCAGGCTCCCATGGCTTGGCTGGGTTTCCTGCTAAGAACAGAAAAGGGGGTG
TGGGTCCAAAGAGAGCCAACCTGCCAAAGAGGGAGAAGGCAAACTTGAAAGAGCCCACGG
AACACGGCGGGTGGGGCTGCCCTGTGACGCCAAAGCCCAGGCAGAAGCGGCCTTGGCCTC
TCCTGCCCAAAAGGAACAGTGCACGCAGCTAAGGAGCCTGCTCGGCCCTCACTCTGTGCC
TGGTTGTTTTGGAAGACTCGTGTTTTATTTGATTCTAGACTGTGTGGGAGCTGCTGTATT
CTGGAAGTTGTAGAGGATAAAATAATATTATCTGGAAGCTCTGTCTTGTTTACATTCCTG
CATCCCTGTGTCTACTGCCTGGCTGAGGGAGTCACAAAGCTCTGTGTTGTCTGTTTTATT
TTATAACTCCCCCCCCAACTATCAAAATAAACGACCTATCGTTTTCTGTGTTTCCGCCCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGCCCAGAGCCGGCTGCTGGTCCCCCGGGGACGGCGGGCAGGAGCCCTGGCAAAGAGCT
CCCCTGCAGACACAGTGGTGGAGGAGCTGGTGCTCAGGGCCGCGGCGGCCCCGCTCATGG
AGAGGCACGCGCGTGGGGGCATGGCCGTGGCGGCGAGCGTGCACACGGAGGCCTGGCCAC
ATATCACCTCATTTTTAAGAATCAATCACAAGGTGCCAAGGAGGTTTTATTTCCTTTTTT
AAAAGATGACAAATGTACAGATATTAATATATTTTTGGTGCCGATGGCAACTATTTTTAA
GAGAGGATGGAGCTGGCTTTTCTCCTCCCCACGCAGTTCTATTTATCCTGGACATTTCAC
CCCTCCTCTGTGCCTTGGCGCTGGGGTGGCTGCCCTGACCCCACCCTTCATGCCTCCTGA
AGGGTTTCACCTACTCACTCGCAGGGTCATCCAGGTGTTGGGTGGGGTCTGACCAGGAGG
TGAGGCGGGCCCGGGAGTGTCCTGCCATCACTCTTCCCTCTGGGGCGCCGAGTGCAGGCG
GGGTGGCCGGGCTCCAACTTTTGGGAGCCTCGCTCACACTATCCGATACCGAGAGACAGA
AGGTAGAGCTTCCTGTTTGTCTCCACCCTTGGGGAGGCCGAGGTTCATCCATTGCGGCTG
CGGGGCTGAGCCAGATGGGATGGTGTGGCTTCCTCGTGCCCAGTGCCTGCAGTGCTAGGC
ATGCAGGGCCAGGCTGCAAGGCTTCCTCTTTTCCTGGCTGAGTCAAAAATCCTAGGACAG
GAGCAAAAAATTGGGACAGAATAAGAGCCAGACACATCAGAAGCCTTTAGAGGGAGAACA
GTATTCGAGGGCTGACAAGTTATAGTTGGAGCCTTTCTTCTGACTGATTTTCAAAGGGCC
AGGCTGGGGCCTGGGCTCCTAAGGAGGGACCCACCCCTGAGCCAGTCGGCTCCATCTTCG
GGCCTCGGCCAGGCTCCCATGGCTTGGCTGGGTTTCCTGCTAAGAACAGAAAAGGGGGTG
TGGGTCCAAAGAGAGCCAACCTGCCAAAGAGGGAGAAGGCAAACTTGAAAGAGCCCACGG
AACACGGCGGGTGGGGCTGCCCTGTGACGCCAAAGCCCAGGCAGAAGCGGCCTTGGCCTC
TCCTGCCCAAAAGGAACAGTGCACGCAGCTAAGGAGCCTGCTCGGCCCTCACTCTGTGCC
TGGTTGTTTTGGAAGACTCGTGTTTTATTTGATTCTAGACTGTGTGGGAGCTGCTGTATT
CTGGAAGTTGTAGAGGATAAAATAATATTATCTGGAAGCTCTGTCTTGTTTACATTCCTG
CATCCCTGTGTCTACTGCCTGGCTGAGGGAGTCACAAAGCTCTGTGTTGTCTGTTTTATT
TTATAACTCCCCCCCCAACTATCAAAATAAACGACCTATCGTTTTCTGTGTTTCCGCCCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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91-407, gnl|bosTau2|chr29 (38687658-38687344) |
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91-407, gnl|Hg17|chr11 (65319891-65320253) |
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91-407, gnl|Mm7|chr19 (5445333-5444962) |
| |
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683-1342, gnl|bosTau2|chr29 (38687062-38686384) |
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683-1342, gnl|canFam2|chr18 (54480011-54478710) |
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683-1342, gnl|hg17|chr11 (65320130-65321416) |
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683-1342, gnl|Hg17|chr11 (65320470-65321183) |
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683-1342, gnl|loxAfr1|scaffold_15739 (7727-6453) |
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683-1342, gnl|mm7|chr19 (5445077-5443886) |
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683-1342, gnl|Mm7|chr19 (5444732-5444133) |
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683-1342, gnl|monDom2|scaffold_107 (3077022-3075709) |
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683-1342, gnl|panTro1|chr9 (66565726-66567004) |
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683-1342, gnl|rheMac2|chr14 (8666384-8665090) |
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683-1342, gnl|rn3|chr1 (208347594-208346350) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
91-407, gnl|bosTau2|chr29 (38687658-38687344) |
|
91-407, gnl|Hg17|chr11 (65319891-65320253) |
|
91-407, gnl|Mm7|chr19 (5445333-5444962) |
| |
|
683-1342, gnl|bosTau2|chr29 (38687062-38686384) |
|
683-1342, gnl|canFam2|chr18 (54480011-54478710) |
|
683-1342, gnl|hg17|chr11 (65320130-65321416) |
|
683-1342, gnl|Hg17|chr11 (65320470-65321183) |
|
683-1342, gnl|loxAfr1|scaffold_15739 (7727-6453) |
|
683-1342, gnl|mm7|chr19 (5445077-5443886) |
|
683-1342, gnl|Mm7|chr19 (5444732-5444133) |
|
683-1342, gnl|monDom2|scaffold_107 (3077022-3075709) |
|
683-1342, gnl|panTro1|chr9 (66565726-66567004) |
|
683-1342, gnl|rheMac2|chr14 (8666384-8665090) |
|
683-1342, gnl|rn3|chr1 (208347594-208346350) |
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nep (0.551775) |
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ldo (0.0970026) |
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nep (0.551775) |
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ldo (0.0970026) |
