Ss1.1-Pig4-TMW8053E14.5
|
CCGGCTCCAACCTGTCCGGATAGGAGGCCGCATGGCTTCTGCTTCCTCCGCTGCGGCCCT
TTCGGGCCGCGGGGCCCGGAACCTGTTGCAGTTCCTGCGGCTGGTGGGGCAGCTCAAGAG
GGTCCCACGGACTGGCTGGGTATACAGAAATGTCCAGAAGCCAGAGAGTGTATCAGATCA
CATGTACAGGATGGCAGTTATGGCTCTGGTGACCAAAGATGAACATCTTAACAAAGACCG
GAAGCTATGAAGCAGCTAACCCAGCTCCTTCCAGAGGATCTGAGAAAGGAGCTCTACGAA
CTTTGGGAAGAATATGAGACCCAATCTAGTGCAGAAGCCAGATATGTGAAGCAGCTGGAC
CAATGTGAGATGATTCTTCAGGCGTCTGAATATGAAGACCTTGAGAACAAACCCGGGCGA
CTGCAGGACTTCTACGATTCCACGACAGGAAAATTCAGTCACCCAGAGATAGTCCAGCTT
GTTTCTGAACTTGAGGAAGAACGAAACGCTAACATAGCTGCTGCTGCCTCCACCGCTGCC
AGTAAACCAAGCTCCTGAGATGTTCTCTACATTGCTGCGCTCCTGTTACAAACGTTTTAG
TTTTTCCGTTTCATGGTATTGTGTTTTGCCACTGTTGGTCTCTTGATTTCCACAGATGTA
CGTCTGTTTATTTTCAATTGCCTGGACTCCAGCAAGAAATGTTATACATACCACTGGGGC
AATAGAAAAAGCTACAGAACAGGATGTGGGCATGAAAGTCCCATGGATGAAGACTTGGAG
GGTGGAGGGCTTTTATGAACTAAATAAATACATTTTAAAACCCTTAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCGGCTCCAACCTGTCCGGATAGGAGGCCGCATGGCTTCTGCTTCCTCCGCTGCGGCCCT
TTCGGGCCGCGGGGCCCGGAACCTGTTGCAGTTCCTGCGGCTGGTGGGGCAGCTCAAGAG
GGTCCCACGGACTGGCTGGGTATACAGAAATGTCCAGAAGCCAGAGAGTGTATCAGATCA
CATGTACAGGATGGCAGTTATGGCTCTGGTGACCAAAGATGAACATCTTAACAAAGACCG
GAAGCTATGAAGCAGCTAACCCAGCTCCTTCCAGAGGATCTGAGAAAGGAGCTCTACGAA
CTTTGGGAAGAATATGAGACCCAATCTAGTGCAGAAGCCAGATATGTGAAGCAGCTGGAC
CAATGTGAGATGATTCTTCAGGCGTCTGAATATGAAGACCTTGAGAACAAACCCGGGCGA
CTGCAGGACTTCTACGATTCCACGACAGGAAAATTCAGTCACCCAGAGATAGTCCAGCTT
GTTTCTGAACTTGAGGAAGAACGAAACGCTAACATAGCTGCTGCTGCCTCCACCGCTGCC
AGTAAACCAAGCTCCTGAGATGTTCTCTACATTGCTGCGCTCCTGTTACAAACGTTTTAG
TTTTTCCGTTTCATGGTATTGTGTTTTGCCACTGTTGGTCTCTTGATTTCCACAGATGTA
CGTCTGTTTATTTTCAATTGCCTGGACTCCAGCAAGAAATGTTATACATACCACTGGGGC
AATAGAAAAAGCTACAGAACAGGATGTGGGCATGAAAGTCCCATGGATGAAGACTTGGAG
GGTGGAGGGCTTTTATGAACTAAATAAATACATTTTAAAACCCTTAAAAAAAAAAAAAAA
AAAAAAAAAAAA
|
|
117-251, gnl|bosTau2|chr9 (13654109-13653974) |
|
117-251, gnl|canFam2|chr1 (67303990-67304119) |
|
117-251, gnl|danRer3|chr17 (38140064-38139960) |
|
117-251, gnl|dasNov1|scaffold_5742 (1790-1661) |
|
117-251, gnl|echTel1|scaffold_308036 (189325-189447) |
|
117-251, gnl|fr1|chrUn (265514358-265514254) |
|
117-251, gnl|hg17|chr6 (125663357-125663486) |
|
117-251, gnl|Hg17|chr6 (125663506-125663368) |
|
117-251, gnl|loxAfr1|scaffold_834 (146975-147104) |
|
117-251, gnl|mm7|chr10 (31095307-31095179) |
|
117-251, gnl|Mm7|chr10 (31095157-31095294) |
|
117-251, gnl|monDom2|scaffold_0 (88943962-88943838) |
|
117-251, gnl|panTro1|chr5 (128189991-128190120) |
|
117-251, gnl|rheMac2|chr4 (138639919-138639790) |
|
117-251, gnl|rn3|chr1 (26976794-26976922) |
|
117-251, gnl|tetNig1|chr14 (6365965-6365861) |
| |
|
446-828, gnl|bosTau2|chr9 (13637217-13636865) |
|
446-828, gnl|Hg17|chr6 (125639091-125638727) |
|
446-828, gnl|Mm7|chr10 (31108522-31108850) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
117-251, gnl|bosTau2|chr9 (13654109-13653974) |
|
117-251, gnl|canFam2|chr1 (67303990-67304119) |
|
117-251, gnl|danRer3|chr17 (38140064-38139960) |
|
117-251, gnl|dasNov1|scaffold_5742 (1790-1661) |
|
117-251, gnl|echTel1|scaffold_308036 (189325-189447) |
|
117-251, gnl|fr1|chrUn (265514358-265514254) |
|
117-251, gnl|hg17|chr6 (125663357-125663486) |
|
117-251, gnl|Hg17|chr6 (125663506-125663368) |
|
117-251, gnl|loxAfr1|scaffold_834 (146975-147104) |
|
117-251, gnl|mm7|chr10 (31095307-31095179) |
|
117-251, gnl|Mm7|chr10 (31095157-31095294) |
|
117-251, gnl|monDom2|scaffold_0 (88943962-88943838) |
|
117-251, gnl|panTro1|chr5 (128189991-128190120) |
|
117-251, gnl|rheMac2|chr4 (138639919-138639790) |
|
117-251, gnl|rn3|chr1 (26976794-26976922) |
|
117-251, gnl|tetNig1|chr14 (6365965-6365861) |
| |
|
446-828, gnl|bosTau2|chr9 (13637217-13636865) |
|
446-828, gnl|Hg17|chr6 (125639091-125638727) |
|
446-828, gnl|Mm7|chr10 (31108522-31108850) |
|
cbe (0.478469) |
|
vin (0.332557) |
|
fcc (0.197785) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
tbr (0.154178) |
|
lun (0.150489) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
clu (0.119646) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
|
cbe (0.478469) |
|
vin (0.332557) |
|
fcc (0.197785) |
|
cmu (0.186393) |
|
sag (0.182715) |
|
tbr (0.154178) |
|
lun (0.150489) |
|
lyg (0.133103) |
|
sug (0.127291) |
|
clu (0.119646) |
|
ebs (0.118301) |
|
nbm (0.0993246) |
