Non-Coding RNA Search

Ss1.1-Pig4-TMW8053G14.3

Sequence:


               
               TGGCATAGGGCTAGCTGATCTCCACAAACCTCTGTAGGTCAGTAGTTCTCAAAATGTGGT
CCCTGGTGGTACTTGTCACAAATGCAAATTCTAGGGCTCACCCTAGATTTATAGGATCAG
AAACTCTGGGGGTAAGTCCCCTAGAAATCTGTGTTCTAATGAGCCCTCCAGGTGATTTCT
GATGCACTGTGACGACTAAGACGTGCTCTAGGCAAACACCAGAGAAACAATTCTACAGAC
AGTTACCAGGTTTAGCTGGCCACTGCTGATCCATCCATACCTCTCTTTACAGTCCCAAAT
TGCGAATGACCTTAAGGTCATCTAATTGTACTACTACTAAAGCCCTCCACTGGTGCTGAT
GCCAAGTGACTGGCCTCTACTTGTTCCCGGGGCTCCCTCTTTTCTTGCCCTCTTATCAGT
GTTTAAAATCTGAGGAAGCTAAAACCTTAAATTCCAATGAAGCCATATTAATAGTTTCTC
AGTCGATCTAAAGTATTTCTAAAATTGAGCATTGAAACATAGCACATGTGCATGGCTTTC
AAGATACCTATCAGTAGTTTGTAAGGTTATGAAGATTTAACTTTGTAGATAAAATGTAAA
TAACTTGTTTCTTTTAAATGTGAGGCTTCAACTTTGGAATTTCAGAGTGTGCTAAAATAA
TGGATTTCTCAGACGTCTTTCTGCAAGATAAACATTATCGAGTAATTTATTTATAAAATT
ATTACAATAATGCCAAATTTGAATTTTATTGCTAATTTAACTTACAAGGGTTTTTCTATG
CATCCAGTGTAACTTACTGCTACTAAACTTAATTTAATATTTACTCTATAACCAAATGAA
ACATATTTAAAATATATTGAATATTTTATATTATTATATCTTGACAAAATTACAATATTG
TAATGTACTAATATCTCTGTAATTACAGCTTAAATATTATTTTATTGTATTGTCTAAGAA
TAAAATGGAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGCATAGGGCTAGCTGATCTCCACAAACCTCTGTAGGTCAGTAGTTCTCAAAATGTGGT
CCCTGGTGGTACTTGTCACAAATGCAAATTCTAGGGCTCACCCTAGATTTATAGGATCAG
AAACTCTGGGGGTAAGTCCCCTAGAAATCTGTGTTCTAATGAGCCCTCCAGGTGATTTCT
GATGCACTGTGACGACTAAGACGTGCTCTAGGCAAACACCAGAGAAACAATTCTACAGAC
AGTTACCAGGTTTAGCTGGCCACTGCTGATCCATCCATACCTCTCTTTACAGTCCCAAAT
TGCGAATGACCTTAAGGTCATCTAATTGTACTACTACTAAAGCCCTCCACTGGTGCTGAT
GCCAAGTGACTGGCCTCTACTTGTTCCCGGGGCTCCCTCTTTTCTTGCCCTCTTATCAGT
GTTTAAAATCTGAGGAAGCTAAAACCTTAAATTCCAATGAAGCCATATTAATAGTTTCTC
AGTCGATCTAAAGTATTTCTAAAATTGAGCATTGAAACATAGCACATGTGCATGGCTTTC
AAGATACCTATCAGTAGTTTGTAAGGTTATGAAGATTTAACTTTGTAGATAAAATGTAAA
TAACTTGTTTCTTTTAAATGTGAGGCTTCAACTTTGGAATTTCAGAGTGTGCTAAAATAA
TGGATTTCTCAGACGTCTTTCTGCAAGATAAACATTATCGAGTAATTTATTTATAAAATT
ATTACAATAATGCCAAATTTGAATTTTATTGCTAATTTAACTTACAAGGGTTTTTCTATG
CATCCAGTGTAACTTACTGCTACTAAACTTAATTTAATATTTACTCTATAACCAAATGAA
ACATATTTAAAATATATTGAATATTTTATATTATTATATCTTGACAAAATTACAATATTG
TAATGTACTAATATCTCTGTAATTACAGCTTAAATATTATTTTATTGTATTGTCTAAGAA
TAAAATGGAAAA

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               1-972, gnl|bosTau2|chr2 (69031335-69032308)
               

               
               1-972, gnl|Hg17|chr2 (228004012-228005006)
               

               
               1-972, gnl|Mm7|chr1 (82929544-82930735)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-972, gnl|bosTau2|chr2 (69031335-69032308)
               

               
               1-972, gnl|Hg17|chr2 (228004012-228005006)
               

               
               1-972, gnl|Mm7|chr1 (82929544-82930735)

Expressed library(ies): 5 entry(ies)

More info

Expressed library(ies): 5 entry(ies)

Help | Less info


               
               liv (0.585137)
               

               
               sug (0.254582)
               

               
               pan (0.23596)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

Expressed library(ies): 5 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.585137)
               

               
               sug (0.254582)
               

               
               pan (0.23596)
               

               
               kid (0.129735)
               

               
               ret (0.128733)

	1-972, gnl\|bosTau2\|chr2 (69031335-69032308)
	1-972, gnl\|Hg17\|chr2 (228004012-228005006)
	1-972, gnl\|Mm7\|chr1 (82929544-82930735)

	liv (0.585137)
	sug (0.254582)
	pan (0.23596)
	kid (0.129735)
	ret (0.128733)