Non-Coding RNA Search

Ss1.1-Pig4-TMW8053H19.3

Sequence:


               
               GGCGGCCTTTGCTGTGAGTGTTTGGGGACCAGACTTCATATTTCAGAGCAATTTGTCAAG
TGTTACCCCTTTTCTTGCGGGGTGGGGGGGTGTTGGTGGAGAGGTTGCCTGGTATCTTCA
GTGATTTGTGAGTTATCTCTGTTATCAACTTAGTTGTACGAGAAAACTAGTTGGGCTCAT
TTATTTTCTAGAGGCTTTTAGAGGTATACTCAGTTTGTCAGGGAGAATGTTAACTCTGTG
ATAGTCCATCCCATATTATAAAAGAATAATATGTGCGTATGTGTGTATAGATCCTTCCAT
GTAGCTATTTCTTTGATACTTGTTCCTTTAATTTTAACTTCAAAATAGAAAATAATATAA
AAACGTTTCCGGTTTACAAAATGTAAAATCTTATACAAGCCAATGGACTCCTGGATTTCC
TACCTCAGTGTACACGGGACTGTTTGTCATATCAGTTTGTGTATGTGCAAATGTCAAATC
ATCTTTTGCTTTAATTGCTACTGTAAATAACTGCTTTGAAATACTTATTTAATGATAGTC
TTCAGAGTTTAAATATGATTTTTAAGGCACTTGGTTTAAATTTCTCTCTACATATAAATA
GTTTAGCATTAAGGGTTTATTTTAAATGATACTCTGATTCTTGGCCAAGTGTAATATTTC
ATAAAATATAGCATTACTTTTAATAGCCAGCATGTAATACAAGTAAAACTACACTACCTC
ATACCTACATGATTTTCAAGTTGTAATCCAGAGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGCCTTTGCTGTGAGTGTTTGGGGACCAGACTTCATATTTCAGAGCAATTTGTCAAG
TGTTACCCCTTTTCTTGCGGGGTGGGGGGGTGTTGGTGGAGAGGTTGCCTGGTATCTTCA
GTGATTTGTGAGTTATCTCTGTTATCAACTTAGTTGTACGAGAAAACTAGTTGGGCTCAT
TTATTTTCTAGAGGCTTTTAGAGGTATACTCAGTTTGTCAGGGAGAATGTTAACTCTGTG
ATAGTCCATCCCATATTATAAAAGAATAATATGTGCGTATGTGTGTATAGATCCTTCCAT
GTAGCTATTTCTTTGATACTTGTTCCTTTAATTTTAACTTCAAAATAGAAAATAATATAA
AAACGTTTCCGGTTTACAAAATGTAAAATCTTATACAAGCCAATGGACTCCTGGATTTCC
TACCTCAGTGTACACGGGACTGTTTGTCATATCAGTTTGTGTATGTGCAAATGTCAAATC
ATCTTTTGCTTTAATTGCTACTGTAAATAACTGCTTTGAAATACTTATTTAATGATAGTC
TTCAGAGTTTAAATATGATTTTTAAGGCACTTGGTTTAAATTTCTCTCTACATATAAATA
GTTTAGCATTAAGGGTTTATTTTAAATGATACTCTGATTCTTGGCCAAGTGTAATATTTC
ATAAAATATAGCATTACTTTTAATAGCCAGCATGTAATACAAGTAAAACTACACTACCTC
ATACCTACATGATTTTCAAGTTGTAATCCAGAGGGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-754, gnl|bosTau2|chr1 (6138534-6137778)
               

               
               12-754, gnl|Hg17|chr21 (29638572-29639346)
               

               
               12-754, gnl|Mm7|chr16 (87780290-87781048)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-754, gnl|bosTau2|chr1 (6138534-6137778)
               

               
               12-754, gnl|Hg17|chr21 (29638572-29639346)
               

               
               12-754, gnl|Mm7|chr16 (87780290-87781048)

Expressed library(ies): 3 entry(ies)

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Expressed library(ies): 3 entry(ies)

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               ssp (0.13552)
               

               
               kid (0.129735)
               

               
               cbl (0.114797)

Expressed library(ies): 3 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ssp (0.13552)
               

               
               kid (0.129735)
               

               
               cbl (0.114797)

	12-754, gnl\|bosTau2\|chr1 (6138534-6137778)
	12-754, gnl\|Hg17\|chr21 (29638572-29639346)
	12-754, gnl\|Mm7\|chr16 (87780290-87781048)