Ss1.1-Pig4-TMW8053I19.3.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGCAGAGCATTTCCTGGAGAAATTTAGGCCAGGAAAGTGGATCATTCAATATAACAAAC TTAACCTCAAGACACCTGTGCCAAGTGACATTGATATATCACGGTCTTGCAAGCCAAAGC CCATTGGTAACCTGGCTCGAGAAATTGGTCTGCTCTCTGAAGAGGTAGAATTATATGGTG AAACCAAGGCCAAGGTCCTGCTGTCGTCCCTGGAACGCCTGAAGCACCAGCCTGACGGGA AATATGTGGTGGTGACTGGCATAACTCCAACTCCCCTGGGAGAGGGGAAAAGCACAACCA CGATTGGGTTGGTGCAGGCCCTTGGCTCCCATCTCCATCAGAACGTCTTCGCGTGTGTGC GACAGCCTTCCCAGGGCCCCACCTTTGGAATAAAAGGTGGCGCTGCAGGCGGTGGCTACT CACAGGTCATTCCTATGGAAGAGTTTAATCTCCACCTCACTGGTGACATCCATGCCATCA CCGCAGCTAATAACCTTGTTGCTGCAGCCATCGATGCCCGGATGTTCCATGAACAGACCC AGACAGACAAGGCTCTCTTTAATCGTTTGGTGCCATCAGTAAATGGAGTGAGAAAGTTCT CTGATATCCAACTCCGGAGGCTGTGGAGACTAGGCATTGAAAAGACTGACCCTACCACAC TGACAGATGAAGAGATAAACAGATTTGCAAGATTGGACATTGATCCAGAAACTATAACTT GGCAAAGAGTGTTGGATACCAATGATAGATTCCTGAGGAAGATCACAATTGGACAGGCTC CCACGGAGAAGGGGCACTCACGGACGGCGCAGTTTGATATCTCTGTGGCAAGTGAAATCA TGGCTGTCCTGGCTCTCACCAGTTCTCTAGAAGACATGAGAGAGAGACTGAGCAAAATGG TGGTGGCATCCAGCAAGAAAGGGGAGCCCATCAGTGCTGAAGATCTGGGTGTGAGCGGAG CGTTGACGGTACTTATGAAGGACGCCATCAAGCCCAACCTCATGCAGACATTAGAGGGCA CCCCAGTGTTCGTTCATGCCGGGCCGTTTGCCAACATCGCACACGGAAATTCGTCCATCA TTGCAGACCGGATTGCACTCAAGCTTGTTGGTCCTGAAGGGTTTGTAGTGACCGAAGCAG GATTCGGAGCAGACATCGGAATGGAAAAGTTCTTTAACATCAAGTGCCGGTATTCAGGTC TCCGCCCTCACGTGGTGGTGCTTGTTGCCACTGTCAGGGCTCTGAAAATGCACGGAGGCG GCCCCACGGTTACTGCTGGACTTCCTCTTCCCAAGGCTTACATAGAGGAGAACCTGGAGT TGGTTGAAAAAGGCTTCAGTAACTTGAGGAAACAAATTGAAAATGCCAAAATGTTTGGAG TTCCTGTGGTAGTGGCTGTGAATGCCTTTAAGACAGATACAGAGGCTGAGCTGGACCTCG TCAGCCGCCTCGCCAAGGAACATGGGGCTTTTGATGCTGTGAAGTGCACTCACTGGGCAG AAGGGGGCAAGGGCGCCCTGGCGCTGGCTCAGGCCGTCCAGAGAGCAGCTCAGGCTCCCA GCAGCTTCCAGCTCCTCTATGACCTCGAGCTCCCAATTGAGGATAAAATCAGGATCATTG CGCAGAAGATCTATGGGGCAGATGACATTGAATTGCTCCCTGAAGCACAGCACAAAGCTG AAGTCTACACAAAGCAGGGCTTTGGGAATCTGCCCATCTGCATGGCCAAGACACACCTGT CCTTGTCGCACAACCCAGAGCAAAAAGGCGTGCCCACGGGCTTCGTCCTGCCTATTCGAG ACATCCGTGCAAGCGTTGGGGCTGGCTTTCTGTACCCCTTGGTGGGAACGATGAGCACCA TGCCTGGACTCCCTACCCGGCCCTGTTTCTATGACATCGATTTGGACCCTGAAACTGAGC AGGTGAATGGGCTGTTCTAAACAGATTGTCCAGCTTCAGGAAGCTGCTTTGAAGGTTTGG CCAGTGTTTATTCAGGCCCCCTGTCAGGAAGTGTGGGGAGATCAGAAGTCAGTCCCTGCC CCGAAGATCTTCAGAAATAAGTAGTGGGAGTTTCCCCAGAAGCCTTTCTTCAGTCTTACT TCCCATCATCATGTATAAATTAGCATAAATCACACACATCTTTAATTACTAAATCCATAG AATAAAAGCACATAATTTTGCAAAAAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGCAGAGCATTTCCTGGAGAAATTTAGGCCAGGAAAGTGGATCATTCAATATAACAAAC TTAACCTCAAGACACCTGTGCCAAGTGACATTGATATATCACGGTCTTGCAAGCCAAAGC CCATTGGTAACCTGGCTCGAGAAATTGGTCTGCTCTCTGAAGAGGTAGAATTATATGGTG AAACCAAGGCCAAGGTCCTGCTGTCGTCCCTGGAACGCCTGAAGCACCAGCCTGACGGGA AATATGTGGTGGTGACTGGCATAACTCCAACTCCCCTGGGAGAGGGGAAAAGCACAACCA CGATTGGGTTGGTGCAGGCCCTTGGCTCCCATCTCCATCAGAACGTCTTCGCGTGTGTGC GACAGCCTTCCCAGGGCCCCACCTTTGGAATAAAAGGTGGCGCTGCAGGCGGTGGCTACT CACAGGTCATTCCTATGGAAGAGTTTAATCTCCACCTCACTGGTGACATCCATGCCATCA CCGCAGCTAATAACCTTGTTGCTGCAGCCATCGATGCCCGGATGTTCCATGAACAGACCC AGACAGACAAGGCTCTCTTTAATCGTTTGGTGCCATCAGTAAATGGAGTGAGAAAGTTCT CTGATATCCAACTCCGGAGGCTGTGGAGACTAGGCATTGAAAAGACTGACCCTACCACAC TGACAGATGAAGAGATAAACAGATTTGCAAGATTGGACATTGATCCAGAAACTATAACTT GGCAAAGAGTGTTGGATACCAATGATAGATTCCTGAGGAAGATCACAATTGGACAGGCTC CCACGGAGAAGGGGCACTCACGGACGGCGCAGTTTGATATCTCTGTGGCAAGTGAAATCA TGGCTGTCCTGGCTCTCACCAGTTCTCTAGAAGACATGAGAGAGAGACTGAGCAAAATGG TGGTGGCATCCAGCAAGAAAGGGGAGCCCATCAGTGCTGAAGATCTGGGTGTGAGCGGAG CGTTGACGGTACTTATGAAGGACGCCATCAAGCCCAACCTCATGCAGACATTAGAGGGCA CCCCAGTGTTCGTTCATGCCGGGCCGTTTGCCAACATCGCACACGGAAATTCGTCCATCA TTGCAGACCGGATTGCACTCAAGCTTGTTGGTCCTGAAGGGTTTGTAGTGACCGAAGCAG GATTCGGAGCAGACATCGGAATGGAAAAGTTCTTTAACATCAAGTGCCGGTATTCAGGTC TCCGCCCTCACGTGGTGGTGCTTGTTGCCACTGTCAGGGCTCTGAAAATGCACGGAGGCG GCCCCACGGTTACTGCTGGACTTCCTCTTCCCAAGGCTTACATAGAGGAGAACCTGGAGT TGGTTGAAAAAGGCTTCAGTAACTTGAGGAAACAAATTGAAAATGCCAAAATGTTTGGAG TTCCTGTGGTAGTGGCTGTGAATGCCTTTAAGACAGATACAGAGGCTGAGCTGGACCTCG TCAGCCGCCTCGCCAAGGAACATGGGGCTTTTGATGCTGTGAAGTGCACTCACTGGGCAG AAGGGGGCAAGGGCGCCCTGGCGCTGGCTCAGGCCGTCCAGAGAGCAGCTCAGGCTCCCA GCAGCTTCCAGCTCCTCTATGACCTCGAGCTCCCAATTGAGGATAAAATCAGGATCATTG CGCAGAAGATCTATGGGGCAGATGACATTGAATTGCTCCCTGAAGCACAGCACAAAGCTG AAGTCTACACAAAGCAGGGCTTTGGGAATCTGCCCATCTGCATGGCCAAGACACACCTGT CCTTGTCGCACAACCCAGAGCAAAAAGGCGTGCCCACGGGCTTCGTCCTGCCTATTCGAG ACATCCGTGCAAGCGTTGGGGCTGGCTTTCTGTACCCCTTGGTGGGAACGATGAGCACCA TGCCTGGACTCCCTACCCGGCCCTGTTTCTATGACATCGATTTGGACCCTGAAACTGAGC AGGTGAATGGGCTGTTCTAAACAGATTGTCCAGCTTCAGGAAGCTGCTTTGAAGGTTTGG CCAGTGTTTATTCAGGCCCCCTGTCAGGAAGTGTGGGGAGATCAGAAGTCAGTCCCTGCC CCGAAGATCTTCAGAAATAAGTAGTGGGAGTTTCCCCAGAAGCCTTTCTTCAGTCTTACT TCCCATCATCATGTATAAATTAGCATAAATCACACACATCTTTAATTACTAAATCCATAG AATAAAAGCACATAATTTTGCAAAAAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 806-924, + strand, RNAz p=0.650174 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 806-924, + strand, RNAz p=0.650174 |
| Aligned organism(s): 221 entry(ies) | More info |
| Aligned organism(s): 221 entry(ies) | Help | Less info |
| 83-259, gnl|bosTau2|chr10 (51671433-51671257) | |
| 83-259, gnl|canFam2|chr1 (32945103-32945276) | |
| 83-259, gnl|danRer3|chrNA (134457051-134456878) | |
| 83-259, gnl|dasNov1|scaffold_100970 (2541-2391) | |
| 83-259, gnl|echTel1|scaffold_298724 (5521-5694) | |
| 83-259, gnl|fr1|chrUn (59931426-59931253) | |
| 83-259, gnl|Hg17|chr14 (63962487-63962663) | |
| 83-259, gnl|hg17|chrX (57303774-57303947) | |
| 83-259, gnl|loxAfr1|scaffold_35660 (14830-15003) | |
| 83-259, gnl|mm7|chr12 (74248044-74247872) | |
| 83-259, gnl|Mm7|chr12 (74247868-74248044) | |
| 83-259, gnl|monDom2|scaffold_8 (78100232-78100059) | |
| 83-259, gnl|oryCun1|scaffold_205866 (15060-14888) | |
| 83-259, gnl|panTro1|chrX (58728362-58728534) | |
| 83-259, gnl|rheMac2|chrX (55759311-55759484) | |
| 83-259, gnl|rn3|chr3 (116473966-116473793) | |
| 83-259, gnl|tetNig1|chr10 (3742285-3742112) | |
| 83-259, gnl|xenTro1|scaffold_25461 (2618-2791) | |
| 261-398, gnl|bosTau2|chr10 (51670617-51670480) | |
| 261-398, gnl|canFam2|chr1 (44403910-44403795) | |
| 261-398, gnl|canFam2|chr1 (32944963-32945102) | |
| 261-398, gnl|canFam2|chr8 (41894110-41894274) | |
| 261-398, gnl|danRer3|chr20 (40834396-40834279) | |
| 261-398, gnl|danRer3|chrNA (134457168-134457313) | |
| 261-398, gnl|danRer3|chrNA (134457310-134457172) | |
| 261-398, gnl|dasNov1|scaffold_100970 (2543-2669) | |
| 261-398, gnl|dasNov1|scaffold_100970 (2666-2542) | |
| 261-398, gnl|dasNov1|scaffold_187181 (2579-2694) | |
| 261-398, gnl|echTel1|scaffold_298724 (4791-4632) | |
| 261-398, gnl|echTel1|scaffold_298724 (4657-4756) | |
| 261-398, gnl|echTel1|scaffold_298724 (4635-4773) | |
| 261-398, gnl|fr1|chrUn (59931540-59931684) | |
| 261-398, gnl|fr1|chrUn (133278374-133278491) | |
| 261-398, gnl|fr1|chrUn (59931684-59931546) | |
| 261-398, gnl|galGal2|chr5 (49711280-49711116) | |
| 261-398, gnl|hg17|chr11 (18851354-18851470) | |
| 261-398, gnl|hg17|chr14 (63963786-63963950) | |
| 261-398, gnl|Hg17|chr14 (63963809-63963946) | |
| 261-398, gnl|hg17|chrX (57303635-57303773) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14254-14090) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14115-14230) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14093-14231) | |
| 261-398, gnl|mm7|chr10 (6318667-6318784) | |
| 261-398, gnl|mm7|chr12 (74249151-74249309) | |
| 261-398, gnl|mm7|chr12 (74249302-74249168) | |
| 261-398, gnl|Mm7|chr12 (74249168-74249305) | |
| 261-398, gnl|monDom2|scaffold_8 (78101556-78101723) | |
| 261-398, gnl|monDom2|scaffold_8 (78101720-78101582) | |
| 261-398, gnl|oryCun1|scaffold_198553 (93402-93519) | |
| 261-398, gnl|oryCun1|scaffold_205866 (16670-16834) | |
| 261-398, gnl|oryCun1|scaffold_205866 (16827-16693) | |
| 261-398, gnl|panTro1|chr15 (63531690-63531854) | |
| 261-398, gnl|panTro1|chr9 (19081089-19081205) | |
| 261-398, gnl|panTro1|chrX (58728223-58728361) | |
| 261-398, gnl|rheMac2|chr14 (52986995-52986879) | |
| 261-398, gnl|rheMac2|chr7 (127422805-127422969) | |
| 261-398, gnl|rheMac2|chrX (55759175-55759310) | |
| 261-398, gnl|rn3|chr3 (116474083-116473966) | |
| 261-398, gnl|rn3|chr3 (116474105-116473967) | |
| 261-398, gnl|rn3|chr6 (98889007-98889169) | |
| 261-398, gnl|tetNig1|chr10 (3742445-3742589) | |
| 261-398, gnl|tetNig1|chr10 (3742567-3742452) | |
| 261-398, gnl|tetNig1|chr10 (3742589-3742452) | |
| 261-398, gnl|xenTro1|scaffold_1121 (34119-34002) | |
| 261-398, gnl|xenTro1|scaffold_421 (3654-3815) | |
| 442-552, gnl|bosTau2|chr10 (51668074-51667964) | |
| 442-552, gnl|canFam2|chr4 (7366600-7366519) | |
| 442-552, gnl|canFam2|chr8 (41896458-41896536) | |
| 442-552, gnl|danRer3|chrNA (134460576-134460653) | |
| 442-552, gnl|dasNov1|scaffold_100970 (2694-2781) | |
| 442-552, gnl|dasNov1|scaffold_155821 (1201-1279) | |
| 442-552, gnl|echTel1|scaffold_298724 (2156-2100) | |
| 442-552, gnl|fr1|chrUn (59931914-59931991) | |
| 442-552, gnl|galGal2|chr5 (49708606-49708531) | |
| 442-552, gnl|hg17|chr1 (232055159-232055220) | |
| 442-552, gnl|hg17|chr14 (63967993-63968071) | |
| 442-552, gnl|Hg17|chr14 (63968001-63968111) | |
| 442-552, gnl|loxAfr1|scaffold_171452 (1803-1720) | |
| 442-552, gnl|loxAfr1|scaffold_35660 (11577-11499) | |
| 442-552, gnl|mm7|chr12 (74252316-74252394) | |
| 442-552, gnl|mm7|chr12 (74252315-74252395) | |
| 442-552, gnl|Mm7|chr12 (74252324-74252434) | |
| 442-552, gnl|monDom2|scaffold_8 (78107091-78107169) | |
| 442-552, gnl|oryCun1|scaffold_205866 (19164-19242) | |
| 442-552, gnl|oryCun1|scaffold_205866 (19163-19243) | |
| 442-552, gnl|panTro1|chr1 (215891242-215891303) | |
| 442-552, gnl|panTro1|chr15 (63535899-63535977) | |
| 442-552, gnl|rheMac2|chr1 (221440353-221440292) | |
| 442-552, gnl|rheMac2|chr7 (127427310-127427388) | |
| 442-552, gnl|rn3|chr3 (116474136-116474219) | |
| 442-552, gnl|rn3|chr6 (98892160-98892238) | |
| 442-552, gnl|tetNig1|chr10 (3742811-3742888) | |
| 442-552, gnl|xenTro1|scaffold_421 (8103-8181) | |
| 626-729, gnl|bosTau2|chr10 (51664930-51664827) | |
| 626-729, gnl|canFam2|chr8 (41899857-41900001) | |
| 626-729, gnl|danRer3|chr20 (39505908-39505797) | |
| 626-729, gnl|dasNov1|scaffold_155821 (5482-5633) | |
| 626-729, gnl|echTel1|scaffold_316126 (25424-25527) | |
| 626-729, gnl|fr1|chrUn (59932237-59932356) | |
| 626-729, gnl|galGal2|chr5 (49706189-49706062) | |
| 626-729, gnl|hg17|chr14 (63972024-63972168) | |
| 626-729, gnl|Hg17|chr14 (63972039-63972142) | |
| 626-729, gnl|loxAfr1|scaffold_35660 (10009-9874) | |
| 626-729, gnl|mm7|chr12 (74255653-74255801) | |
| 626-729, gnl|Mm7|chr12 (74255667-74255770) | |
| 626-729, gnl|monDom2|scaffold_8 (78108798-78108934) | |
| 626-729, gnl|oryCun1|scaffold_205866 (20462-20588) | |
| 626-729, gnl|panTro1|chr15 (63539928-63540072) | |
| 626-729, gnl|rheMac2|chr7 (127431288-127431432) | |
| 626-729, gnl|rn3|chr6 (98896025-98896173) | |
| 626-729, gnl|tetNig1|chr10 (3743145-3743251) | |
| 626-729, gnl|xenTro1|scaffold_421 (12208-12351) | |
| 806-948, gnl|bosTau2|chr10 (51662044-51661902) | |
| 806-948, gnl|canFam2|chr1 (44424690-44424589) | |
| 806-948, gnl|canFam2|chr1 (32944410-32944512) | |
| 806-948, gnl|canFam2|chr8 (41902678-41902846) | |
| 806-948, gnl|danRer3|chr20 (39504081-39503915) | |
| 806-948, gnl|danRer3|chr20 (40843271-40843168) | |
| 806-948, gnl|danRer3|chrNA (134470655-134470556) | |
| 806-948, gnl|dasNov1|scaffold_100970 (3230-3131) | |
| 806-948, gnl|dasNov1|scaffold_68900 (7257-7144) | |
| 806-948, gnl|dasNov1|scaffold_69569 (936-1104) | |
| 806-948, gnl|echTel1|scaffold_154974 (2116-1953) | |
| 806-948, gnl|echTel1|scaffold_154974 (1998-2101) | |
| 806-948, gnl|echTel1|scaffold_154974 (1959-2058) | |
| 806-948, gnl|fr1|chrUn (59932590-59932754) | |
| 806-948, gnl|fr1|chrUn (133275393-133275498) | |
| 806-948, gnl|fr1|chrUn (59932743-59932644) | |
| 806-948, gnl|galGal2|chr5 (49703848-49703697) | |
| 806-948, gnl|galGal2|chr5 (49703703-49703802) | |
| 806-948, gnl|hg17|chr11 (18850046-18850159) | |
| 806-948, gnl|hg17|chr14 (63976580-63976748) | |
| 806-948, gnl|Hg17|chr14 (63976596-63976738) | |
| 806-948, gnl|hg17|chrX (57303087-57303186) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5782-5614) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5664-5759) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5625-5724) | |
| 806-948, gnl|mm7|chr12 (74259426-74259591) | |
| 806-948, gnl|mm7|chr12 (74259545-74259442) | |
| 806-948, gnl|mm7|chr12 (74259584-74259485) | |
| 806-948, gnl|Mm7|chr12 (74259443-74259585) | |
| 806-948, gnl|monDom2|scaffold_29 (13584325-13584215) | |
| 806-948, gnl|monDom2|scaffold_8 (78114990-78115153) | |
| 806-948, gnl|monDom2|scaffold_8 (78115147-78115048) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24806-24970) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24924-24816) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24963-24864) | |
| 806-948, gnl|panTro1|chr15 (63544474-63544642) | |
| 806-948, gnl|panTro1|chr9 (19079782-19079894) | |
| 806-948, gnl|panTro1|chrX (58727675-58727774) | |
| 806-948, gnl|rheMac2|chr14 (52988300-52988190) | |
| 806-948, gnl|rheMac2|chr7 (127437662-127437830) | |
| 806-948, gnl|rheMac2|chrX (55758627-55758726) | |
| 806-948, gnl|rn3|chr3 (116474614-116474503) | |
| 806-948, gnl|rn3|chr3 (116474653-116474554) | |
| 806-948, gnl|rn3|chr6 (98900068-98900232) | |
| 806-948, gnl|tetNig1|chr10 (3743454-3743621) | |
| 806-948, gnl|tetNig1|chr10 (3743573-3743468) | |
| 806-948, gnl|tetNig1|chr10 (3743610-3743511) | |
| 806-948, gnl|xenTro1|scaffold_421 (14925-15090) | |
| 806-948, gnl|xenTro1|scaffold_421 (15044-14940) | |
| 806-948, gnl|xenTro1|scaffold_421 (15082-14983) | |
| 1127-1270, gnl|bosTau2|chr10 (51659906-51659763) | |
| 1127-1270, gnl|canFam2|chr8 (41904800-41904999) | |
| 1127-1270, gnl|danRer3|chr20 (39502989-39502823) | |
| 1127-1270, gnl|dasNov1|scaffold_69569 (3737-3934) | |
| 1127-1270, gnl|echTel1|scaffold_154974 (209-14) | |
| 1127-1270, gnl|fr1|chrUn (59933360-59933533) | |
| 1127-1270, gnl|galGal2|chr5 (49701109-49700860) | |
| 1127-1270, gnl|hg17|chr14 (63978714-63978906) | |
| 1127-1270, gnl|Hg17|chr14 (63978732-63978875) | |
| 1127-1270, gnl|loxAfr1|scaffold_2075 (33767-33966) | |
| 1127-1270, gnl|mm7|chr12 (74262007-74262201) | |
| 1127-1270, gnl|Mm7|chr12 (74262026-74262169) | |
| 1127-1270, gnl|monDom2|scaffold_8 (78120992-78121179) | |
| 1127-1270, gnl|oryCun1|scaffold_205866 (27817-28015) | |
| 1127-1270, gnl|panTro1|chr15 (63546608-63546800) | |
| 1127-1270, gnl|rheMac2|chr7 (127439489-127439681) | |
| 1127-1270, gnl|rn3|chr6 (98902598-98902777) | |
| 1127-1270, gnl|tetNig1|chr10 (3744427-3744589) | |
| 1127-1270, gnl|xenTro1|scaffold_421 (16801-16978) | |
| 1403-1589, gnl|bosTau2|chr10 (51653750-51653562) | |
| 1403-1589, gnl|canFam2|chr1 (32943428-32943601) | |
| 1403-1589, gnl|danRer3|chrNA (134479859-134479684) | |
| 1403-1589, gnl|dasNov1|scaffold_100970 (3862-3774) | |
| 1403-1589, gnl|echTel1|scaffold_297403 (136688-136846) | |
| 1403-1589, gnl|fr1|chrUn (59934340-59934165) | |
| 1403-1589, gnl|galGal2|chr5 (49698147-49698317) | |
| 1403-1589, gnl|Hg17|chr14 (63985905-63986093) | |
| 1403-1589, gnl|hg17|chrX (57302447-57302621) | |
| 1403-1589, gnl|mm7|chr12 (74270168-74269993) | |
| 1403-1589, gnl|Mm7|chr12 (74269982-74270169) | |
| 1403-1589, gnl|monDom2|scaffold_8 (78126866-78126696) | |
| 1403-1589, gnl|oryCun1|scaffold_205866 (32582-32408) | |
| 1403-1589, gnl|panTro1|chrX (58727035-58727209) | |
| 1403-1589, gnl|rheMac2|chrX (55757985-55758160) | |
| 1403-1589, gnl|rn3|chr3 (116475404-116475229) | |
| 1403-1589, gnl|tetNig1|chr10 (3745257-3745082) | |
| 1403-1589, gnl|xenTro1|scaffold_421 (20691-20516) | |
| 1695-1855, gnl|bosTau2|chr10 (51650642-51650482) | |
| 1695-1855, gnl|canFam2|chr1 (32943167-32943275) | |
| 1695-1855, gnl|danRer3|chrNA (134483640-134483531) | |
| 1695-1855, gnl|dasNov1|scaffold_100970 (4099-3988) | |
| 1695-1855, gnl|echTel1|scaffold_297403 (132076-132185) | |
| 1695-1855, gnl|fr1|chrUn (59935167-59935058) | |
| 1695-1855, gnl|galGal2|chr5 (49696103-49696212) | |
| 1695-1855, gnl|Hg17|chr14 (63991191-63991351) | |
| 1695-1855, gnl|hg17|chrX (57302185-57302294) | |
| 1695-1855, gnl|loxAfr1|scaffold_2075 (43372-43263) | |
| 1695-1855, gnl|mm7|chr12 (74273287-74273178) | |
| 1695-1855, gnl|Mm7|chr12 (74273132-74273292) | |
| 1695-1855, gnl|monDom2|scaffold_8 (78134564-78134455) | |
| 1695-1855, gnl|oryCun1|scaffold_175969 (13387-13496) | |
| 1695-1855, gnl|panTro1|chrX (58726773-58726882) | |
| 1695-1855, gnl|rheMac2|chrX (55757723-55757832) | |
| 1695-1855, gnl|rn3|chr3 (116475649-116475553) | |
| 1695-1855, gnl|tetNig1|chr10 (3745813-3745704) | |
| 1695-1855, gnl|xenTro1|scaffold_421 (22558-22449) | |
| 1943-2182, gnl|bosTau2|chr10 (51645600-51645352) | |
| 1943-2182, gnl|Hg17|chr14 (63996228-63996475) | |
| 1943-2182, gnl|Mm7|chr12 (74277765-74277988) |
| Aligned organism(s): 221 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 83-259, gnl|bosTau2|chr10 (51671433-51671257) | |
| 83-259, gnl|canFam2|chr1 (32945103-32945276) | |
| 83-259, gnl|danRer3|chrNA (134457051-134456878) | |
| 83-259, gnl|dasNov1|scaffold_100970 (2541-2391) | |
| 83-259, gnl|echTel1|scaffold_298724 (5521-5694) | |
| 83-259, gnl|fr1|chrUn (59931426-59931253) | |
| 83-259, gnl|Hg17|chr14 (63962487-63962663) | |
| 83-259, gnl|hg17|chrX (57303774-57303947) | |
| 83-259, gnl|loxAfr1|scaffold_35660 (14830-15003) | |
| 83-259, gnl|mm7|chr12 (74248044-74247872) | |
| 83-259, gnl|Mm7|chr12 (74247868-74248044) | |
| 83-259, gnl|monDom2|scaffold_8 (78100232-78100059) | |
| 83-259, gnl|oryCun1|scaffold_205866 (15060-14888) | |
| 83-259, gnl|panTro1|chrX (58728362-58728534) | |
| 83-259, gnl|rheMac2|chrX (55759311-55759484) | |
| 83-259, gnl|rn3|chr3 (116473966-116473793) | |
| 83-259, gnl|tetNig1|chr10 (3742285-3742112) | |
| 83-259, gnl|xenTro1|scaffold_25461 (2618-2791) | |
| 261-398, gnl|bosTau2|chr10 (51670617-51670480) | |
| 261-398, gnl|canFam2|chr1 (44403910-44403795) | |
| 261-398, gnl|canFam2|chr1 (32944963-32945102) | |
| 261-398, gnl|canFam2|chr8 (41894110-41894274) | |
| 261-398, gnl|danRer3|chr20 (40834396-40834279) | |
| 261-398, gnl|danRer3|chrNA (134457168-134457313) | |
| 261-398, gnl|danRer3|chrNA (134457310-134457172) | |
| 261-398, gnl|dasNov1|scaffold_100970 (2543-2669) | |
| 261-398, gnl|dasNov1|scaffold_100970 (2666-2542) | |
| 261-398, gnl|dasNov1|scaffold_187181 (2579-2694) | |
| 261-398, gnl|echTel1|scaffold_298724 (4791-4632) | |
| 261-398, gnl|echTel1|scaffold_298724 (4657-4756) | |
| 261-398, gnl|echTel1|scaffold_298724 (4635-4773) | |
| 261-398, gnl|fr1|chrUn (59931540-59931684) | |
| 261-398, gnl|fr1|chrUn (133278374-133278491) | |
| 261-398, gnl|fr1|chrUn (59931684-59931546) | |
| 261-398, gnl|galGal2|chr5 (49711280-49711116) | |
| 261-398, gnl|hg17|chr11 (18851354-18851470) | |
| 261-398, gnl|hg17|chr14 (63963786-63963950) | |
| 261-398, gnl|Hg17|chr14 (63963809-63963946) | |
| 261-398, gnl|hg17|chrX (57303635-57303773) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14254-14090) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14115-14230) | |
| 261-398, gnl|loxAfr1|scaffold_35660 (14093-14231) | |
| 261-398, gnl|mm7|chr10 (6318667-6318784) | |
| 261-398, gnl|mm7|chr12 (74249151-74249309) | |
| 261-398, gnl|mm7|chr12 (74249302-74249168) | |
| 261-398, gnl|Mm7|chr12 (74249168-74249305) | |
| 261-398, gnl|monDom2|scaffold_8 (78101556-78101723) | |
| 261-398, gnl|monDom2|scaffold_8 (78101720-78101582) | |
| 261-398, gnl|oryCun1|scaffold_198553 (93402-93519) | |
| 261-398, gnl|oryCun1|scaffold_205866 (16670-16834) | |
| 261-398, gnl|oryCun1|scaffold_205866 (16827-16693) | |
| 261-398, gnl|panTro1|chr15 (63531690-63531854) | |
| 261-398, gnl|panTro1|chr9 (19081089-19081205) | |
| 261-398, gnl|panTro1|chrX (58728223-58728361) | |
| 261-398, gnl|rheMac2|chr14 (52986995-52986879) | |
| 261-398, gnl|rheMac2|chr7 (127422805-127422969) | |
| 261-398, gnl|rheMac2|chrX (55759175-55759310) | |
| 261-398, gnl|rn3|chr3 (116474083-116473966) | |
| 261-398, gnl|rn3|chr3 (116474105-116473967) | |
| 261-398, gnl|rn3|chr6 (98889007-98889169) | |
| 261-398, gnl|tetNig1|chr10 (3742445-3742589) | |
| 261-398, gnl|tetNig1|chr10 (3742567-3742452) | |
| 261-398, gnl|tetNig1|chr10 (3742589-3742452) | |
| 261-398, gnl|xenTro1|scaffold_1121 (34119-34002) | |
| 261-398, gnl|xenTro1|scaffold_421 (3654-3815) | |
| 442-552, gnl|bosTau2|chr10 (51668074-51667964) | |
| 442-552, gnl|canFam2|chr4 (7366600-7366519) | |
| 442-552, gnl|canFam2|chr8 (41896458-41896536) | |
| 442-552, gnl|danRer3|chrNA (134460576-134460653) | |
| 442-552, gnl|dasNov1|scaffold_100970 (2694-2781) | |
| 442-552, gnl|dasNov1|scaffold_155821 (1201-1279) | |
| 442-552, gnl|echTel1|scaffold_298724 (2156-2100) | |
| 442-552, gnl|fr1|chrUn (59931914-59931991) | |
| 442-552, gnl|galGal2|chr5 (49708606-49708531) | |
| 442-552, gnl|hg17|chr1 (232055159-232055220) | |
| 442-552, gnl|hg17|chr14 (63967993-63968071) | |
| 442-552, gnl|Hg17|chr14 (63968001-63968111) | |
| 442-552, gnl|loxAfr1|scaffold_171452 (1803-1720) | |
| 442-552, gnl|loxAfr1|scaffold_35660 (11577-11499) | |
| 442-552, gnl|mm7|chr12 (74252316-74252394) | |
| 442-552, gnl|mm7|chr12 (74252315-74252395) | |
| 442-552, gnl|Mm7|chr12 (74252324-74252434) | |
| 442-552, gnl|monDom2|scaffold_8 (78107091-78107169) | |
| 442-552, gnl|oryCun1|scaffold_205866 (19164-19242) | |
| 442-552, gnl|oryCun1|scaffold_205866 (19163-19243) | |
| 442-552, gnl|panTro1|chr1 (215891242-215891303) | |
| 442-552, gnl|panTro1|chr15 (63535899-63535977) | |
| 442-552, gnl|rheMac2|chr1 (221440353-221440292) | |
| 442-552, gnl|rheMac2|chr7 (127427310-127427388) | |
| 442-552, gnl|rn3|chr3 (116474136-116474219) | |
| 442-552, gnl|rn3|chr6 (98892160-98892238) | |
| 442-552, gnl|tetNig1|chr10 (3742811-3742888) | |
| 442-552, gnl|xenTro1|scaffold_421 (8103-8181) | |
| 626-729, gnl|bosTau2|chr10 (51664930-51664827) | |
| 626-729, gnl|canFam2|chr8 (41899857-41900001) | |
| 626-729, gnl|danRer3|chr20 (39505908-39505797) | |
| 626-729, gnl|dasNov1|scaffold_155821 (5482-5633) | |
| 626-729, gnl|echTel1|scaffold_316126 (25424-25527) | |
| 626-729, gnl|fr1|chrUn (59932237-59932356) | |
| 626-729, gnl|galGal2|chr5 (49706189-49706062) | |
| 626-729, gnl|hg17|chr14 (63972024-63972168) | |
| 626-729, gnl|Hg17|chr14 (63972039-63972142) | |
| 626-729, gnl|loxAfr1|scaffold_35660 (10009-9874) | |
| 626-729, gnl|mm7|chr12 (74255653-74255801) | |
| 626-729, gnl|Mm7|chr12 (74255667-74255770) | |
| 626-729, gnl|monDom2|scaffold_8 (78108798-78108934) | |
| 626-729, gnl|oryCun1|scaffold_205866 (20462-20588) | |
| 626-729, gnl|panTro1|chr15 (63539928-63540072) | |
| 626-729, gnl|rheMac2|chr7 (127431288-127431432) | |
| 626-729, gnl|rn3|chr6 (98896025-98896173) | |
| 626-729, gnl|tetNig1|chr10 (3743145-3743251) | |
| 626-729, gnl|xenTro1|scaffold_421 (12208-12351) | |
| 806-948, gnl|bosTau2|chr10 (51662044-51661902) | |
| 806-948, gnl|canFam2|chr1 (44424690-44424589) | |
| 806-948, gnl|canFam2|chr1 (32944410-32944512) | |
| 806-948, gnl|canFam2|chr8 (41902678-41902846) | |
| 806-948, gnl|danRer3|chr20 (39504081-39503915) | |
| 806-948, gnl|danRer3|chr20 (40843271-40843168) | |
| 806-948, gnl|danRer3|chrNA (134470655-134470556) | |
| 806-948, gnl|dasNov1|scaffold_100970 (3230-3131) | |
| 806-948, gnl|dasNov1|scaffold_68900 (7257-7144) | |
| 806-948, gnl|dasNov1|scaffold_69569 (936-1104) | |
| 806-948, gnl|echTel1|scaffold_154974 (2116-1953) | |
| 806-948, gnl|echTel1|scaffold_154974 (1998-2101) | |
| 806-948, gnl|echTel1|scaffold_154974 (1959-2058) | |
| 806-948, gnl|fr1|chrUn (59932590-59932754) | |
| 806-948, gnl|fr1|chrUn (133275393-133275498) | |
| 806-948, gnl|fr1|chrUn (59932743-59932644) | |
| 806-948, gnl|galGal2|chr5 (49703848-49703697) | |
| 806-948, gnl|galGal2|chr5 (49703703-49703802) | |
| 806-948, gnl|hg17|chr11 (18850046-18850159) | |
| 806-948, gnl|hg17|chr14 (63976580-63976748) | |
| 806-948, gnl|Hg17|chr14 (63976596-63976738) | |
| 806-948, gnl|hg17|chrX (57303087-57303186) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5782-5614) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5664-5759) | |
| 806-948, gnl|loxAfr1|scaffold_35660 (5625-5724) | |
| 806-948, gnl|mm7|chr12 (74259426-74259591) | |
| 806-948, gnl|mm7|chr12 (74259545-74259442) | |
| 806-948, gnl|mm7|chr12 (74259584-74259485) | |
| 806-948, gnl|Mm7|chr12 (74259443-74259585) | |
| 806-948, gnl|monDom2|scaffold_29 (13584325-13584215) | |
| 806-948, gnl|monDom2|scaffold_8 (78114990-78115153) | |
| 806-948, gnl|monDom2|scaffold_8 (78115147-78115048) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24806-24970) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24924-24816) | |
| 806-948, gnl|oryCun1|scaffold_205866 (24963-24864) | |
| 806-948, gnl|panTro1|chr15 (63544474-63544642) | |
| 806-948, gnl|panTro1|chr9 (19079782-19079894) | |
| 806-948, gnl|panTro1|chrX (58727675-58727774) | |
| 806-948, gnl|rheMac2|chr14 (52988300-52988190) | |
| 806-948, gnl|rheMac2|chr7 (127437662-127437830) | |
| 806-948, gnl|rheMac2|chrX (55758627-55758726) | |
| 806-948, gnl|rn3|chr3 (116474614-116474503) | |
| 806-948, gnl|rn3|chr3 (116474653-116474554) | |
| 806-948, gnl|rn3|chr6 (98900068-98900232) | |
| 806-948, gnl|tetNig1|chr10 (3743454-3743621) | |
| 806-948, gnl|tetNig1|chr10 (3743573-3743468) | |
| 806-948, gnl|tetNig1|chr10 (3743610-3743511) | |
| 806-948, gnl|xenTro1|scaffold_421 (14925-15090) | |
| 806-948, gnl|xenTro1|scaffold_421 (15044-14940) | |
| 806-948, gnl|xenTro1|scaffold_421 (15082-14983) | |
| 1127-1270, gnl|bosTau2|chr10 (51659906-51659763) | |
| 1127-1270, gnl|canFam2|chr8 (41904800-41904999) | |
| 1127-1270, gnl|danRer3|chr20 (39502989-39502823) | |
| 1127-1270, gnl|dasNov1|scaffold_69569 (3737-3934) | |
| 1127-1270, gnl|echTel1|scaffold_154974 (209-14) | |
| 1127-1270, gnl|fr1|chrUn (59933360-59933533) | |
| 1127-1270, gnl|galGal2|chr5 (49701109-49700860) | |
| 1127-1270, gnl|hg17|chr14 (63978714-63978906) | |
| 1127-1270, gnl|Hg17|chr14 (63978732-63978875) | |
| 1127-1270, gnl|loxAfr1|scaffold_2075 (33767-33966) | |
| 1127-1270, gnl|mm7|chr12 (74262007-74262201) | |
| 1127-1270, gnl|Mm7|chr12 (74262026-74262169) | |
| 1127-1270, gnl|monDom2|scaffold_8 (78120992-78121179) | |
| 1127-1270, gnl|oryCun1|scaffold_205866 (27817-28015) | |
| 1127-1270, gnl|panTro1|chr15 (63546608-63546800) | |
| 1127-1270, gnl|rheMac2|chr7 (127439489-127439681) | |
| 1127-1270, gnl|rn3|chr6 (98902598-98902777) | |
| 1127-1270, gnl|tetNig1|chr10 (3744427-3744589) | |
| 1127-1270, gnl|xenTro1|scaffold_421 (16801-16978) | |
| 1403-1589, gnl|bosTau2|chr10 (51653750-51653562) | |
| 1403-1589, gnl|canFam2|chr1 (32943428-32943601) | |
| 1403-1589, gnl|danRer3|chrNA (134479859-134479684) | |
| 1403-1589, gnl|dasNov1|scaffold_100970 (3862-3774) | |
| 1403-1589, gnl|echTel1|scaffold_297403 (136688-136846) | |
| 1403-1589, gnl|fr1|chrUn (59934340-59934165) | |
| 1403-1589, gnl|galGal2|chr5 (49698147-49698317) | |
| 1403-1589, gnl|Hg17|chr14 (63985905-63986093) | |
| 1403-1589, gnl|hg17|chrX (57302447-57302621) | |
| 1403-1589, gnl|mm7|chr12 (74270168-74269993) | |
| 1403-1589, gnl|Mm7|chr12 (74269982-74270169) | |
| 1403-1589, gnl|monDom2|scaffold_8 (78126866-78126696) | |
| 1403-1589, gnl|oryCun1|scaffold_205866 (32582-32408) | |
| 1403-1589, gnl|panTro1|chrX (58727035-58727209) | |
| 1403-1589, gnl|rheMac2|chrX (55757985-55758160) | |
| 1403-1589, gnl|rn3|chr3 (116475404-116475229) | |
| 1403-1589, gnl|tetNig1|chr10 (3745257-3745082) | |
| 1403-1589, gnl|xenTro1|scaffold_421 (20691-20516) | |
| 1695-1855, gnl|bosTau2|chr10 (51650642-51650482) | |
| 1695-1855, gnl|canFam2|chr1 (32943167-32943275) | |
| 1695-1855, gnl|danRer3|chrNA (134483640-134483531) | |
| 1695-1855, gnl|dasNov1|scaffold_100970 (4099-3988) | |
| 1695-1855, gnl|echTel1|scaffold_297403 (132076-132185) | |
| 1695-1855, gnl|fr1|chrUn (59935167-59935058) | |
| 1695-1855, gnl|galGal2|chr5 (49696103-49696212) | |
| 1695-1855, gnl|Hg17|chr14 (63991191-63991351) | |
| 1695-1855, gnl|hg17|chrX (57302185-57302294) | |
| 1695-1855, gnl|loxAfr1|scaffold_2075 (43372-43263) | |
| 1695-1855, gnl|mm7|chr12 (74273287-74273178) | |
| 1695-1855, gnl|Mm7|chr12 (74273132-74273292) | |
| 1695-1855, gnl|monDom2|scaffold_8 (78134564-78134455) | |
| 1695-1855, gnl|oryCun1|scaffold_175969 (13387-13496) | |
| 1695-1855, gnl|panTro1|chrX (58726773-58726882) | |
| 1695-1855, gnl|rheMac2|chrX (55757723-55757832) | |
| 1695-1855, gnl|rn3|chr3 (116475649-116475553) | |
| 1695-1855, gnl|tetNig1|chr10 (3745813-3745704) | |
| 1695-1855, gnl|xenTro1|scaffold_421 (22558-22449) | |
| 1943-2182, gnl|bosTau2|chr10 (51645600-51645352) | |
| 1943-2182, gnl|Hg17|chr14 (63996228-63996475) | |
| 1943-2182, gnl|Mm7|chr12 (74277765-74277988) |
| Expressed library(ies): 15 entry(ies) | More info |
| Expressed library(ies): 15 entry(ies) | Help | Less info |
| eye (0.682012) | |
| cki (0.495704) | |
| fli (0.405762) | |
| ill (0.351185) | |
| mas (0.210305) | |
| nep (0.183925) | |
| cut (0.169924) | |
| cli (0.152812) | |
| lun (0.150489) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| cov (0.132153) | |
| bla (0.124347) | |
| cly (0.120642) | |
| eje (0.0988338) |
| Expressed library(ies): 15 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| eye (0.682012) | |
| cki (0.495704) | |
| fli (0.405762) | |
| ill (0.351185) | |
| mas (0.210305) | |
| nep (0.183925) | |
| cut (0.169924) | |
| cli (0.152812) | |
| lun (0.150489) | |
| spl (0.143184) | |
| lnt (0.142308) | |
| cov (0.132153) | |
| bla (0.124347) | |
| cly (0.120642) | |
| eje (0.0988338) |