Ss1.1-Pig4-TMW8053P19.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGAATTTCAAACACAAACAACTGCACGAGCGTGCACCCACCGCGCCGGAGCTTTGCCCCT GATCCGCGCCCGCCCCGTCCGTGCGGCGCGCGGGCGGAGACGCCGTGGCCGCGCCGGAGC TCGGGCCGGGGGCCACCATCGAGGCGGGGGCCGCGCGAGGGCCGGAGCGGAGCGGCGCCG CCACCGCCGCACGCGCAAACTTGGGCTCGCGCTTCCCGGCCCGGCGCGGAGCCCGGGGCG CCCGGAGCCCCGCCATGTCGCGATCCAACCGGCAGAAGGAGTATAAATGCGGGGACCTGG TGTTCGCCAAGATGAAGGGCTACCCACACTGGCCGGCCCGGATTGACGAGATGCCTGAGG CCGCCGTGAAATCCACAGCCAACAAATACCAAGTCTTTTTTTTCGGGACCCACGAGACGG CATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAGGAGTCCAAGGAGAAGTTTGGCAAGC CCAACAAGAGGAAAGGGTTCAGCGAGGGGCTGTGGGAGATCGAGAACAACCCTACCGTCA AGGCTTCTGGCTACCAGTCCTCCCAGAAAAAGAGCTGCGTGGAAGAGCCGGAGCCGAAGG CCGACGCCGCTGAGGGTGACGGCGATAAGAAGGGGAACGCAGAGGGCAGCAGCGACGAGG AAGGGAAGCTGGTCATCGACGAGCCGACCAAGGAGAAGAATGAGAAGGGGGCGCTGAAGA GGAGAGCAGGAGACCTGCTGGAGGACTCCCCCAAACGTCCCAAGGAGGCAGAAGACCCCG AAGGCGAGGAGAAGGAGGTGGCCACCTTGGAGGGTGAAAGGCCCCTTCCAGTGGAGGCAG AGAAGAACAGCACCCCTTCTGAGCCCAGCTCTGGCCGGGGGCCTCCTCCGGAGGAAGAAG AGGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCACCAAGGAAGATGCTGAGGCCCCGGGCA TCAGAGATCATGAGAGCCTGTAGCCACCAATGTTTCAAGAGGAGCCCCCGCCCCGTTCCT GCTGCTGTCTGGGTGCTACTGGGGAAACTGGCCATGGCCTGCAAACTGGGAACCCCTTCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGAATTTCAAACACAAACAACTGCACGAGCGTGCACCCACCGCGCCGGAGCTTTGCCCCT GATCCGCGCCCGCCCCGTCCGTGCGGCGCGCGGGCGGAGACGCCGTGGCCGCGCCGGAGC TCGGGCCGGGGGCCACCATCGAGGCGGGGGCCGCGCGAGGGCCGGAGCGGAGCGGCGCCG CCACCGCCGCACGCGCAAACTTGGGCTCGCGCTTCCCGGCCCGGCGCGGAGCCCGGGGCG CCCGGAGCCCCGCCATGTCGCGATCCAACCGGCAGAAGGAGTATAAATGCGGGGACCTGG TGTTCGCCAAGATGAAGGGCTACCCACACTGGCCGGCCCGGATTGACGAGATGCCTGAGG CCGCCGTGAAATCCACAGCCAACAAATACCAAGTCTTTTTTTTCGGGACCCACGAGACGG CATTCCTGGGCCCCAAAGACCTCTTCCCTTACGAGGAGTCCAAGGAGAAGTTTGGCAAGC CCAACAAGAGGAAAGGGTTCAGCGAGGGGCTGTGGGAGATCGAGAACAACCCTACCGTCA AGGCTTCTGGCTACCAGTCCTCCCAGAAAAAGAGCTGCGTGGAAGAGCCGGAGCCGAAGG CCGACGCCGCTGAGGGTGACGGCGATAAGAAGGGGAACGCAGAGGGCAGCAGCGACGAGG AAGGGAAGCTGGTCATCGACGAGCCGACCAAGGAGAAGAATGAGAAGGGGGCGCTGAAGA GGAGAGCAGGAGACCTGCTGGAGGACTCCCCCAAACGTCCCAAGGAGGCAGAAGACCCCG AAGGCGAGGAGAAGGAGGTGGCCACCTTGGAGGGTGAAAGGCCCCTTCCAGTGGAGGCAG AGAAGAACAGCACCCCTTCTGAGCCCAGCTCTGGCCGGGGGCCTCCTCCGGAGGAAGAAG AGGAAGAAGAAGAAGAAGAAGAAGAAGAGGCCACCAAGGAAGATGCTGAGGCCCCGGGCA TCAGAGATCATGAGAGCCTGTAGCCACCAATGTTTCAAGAGGAGCCCCCGCCCCGTTCCT GCTGCTGTCTGGGTGCTACTGGGGAAACTGGCCATGGCCTGCAAACTGGGAACCCCTTCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 240-1080, gnl|bosTau2|chr23 (29186637-29185817) | |
| 240-1080, gnl|Hg17|chr6 (22677763-22678636) | |
| 240-1080, gnl|Mm7|chr13 (26135656-26134696) | |
| 420-557, gnl|bosTau2|chr21 (18079939-18080076) | |
| 420-557, gnl|canFam2|chr3 (57786514-57786681) | |
| 420-557, gnl|danRer3|chr22 (18494376-18494232) | |
| 420-557, gnl|dasNov1|scaffold_19558 (40355-40188) | |
| 420-557, gnl|echTel1|scaffold_40041 (825-991) | |
| 420-557, gnl|fr1|chrUn (220589581-220589433) | |
| 420-557, gnl|galGal2|chr10 (11840165-11840313) | |
| 420-557, gnl|hg17|chr15 (81617656-81617823) | |
| 420-557, gnl|Hg17|chr15 (81617796-81617659) | |
| 420-557, gnl|loxAfr1|scaffold_2905 (127971-128137) | |
| 420-557, gnl|mm7|chr7 (77773570-77773736) | |
| 420-557, gnl|Mm7|chr7 (77773710-77773573) | |
| 420-557, gnl|monDom2|scaffold_45 (1999835-1999994) | |
| 420-557, gnl|oryCun1|scaffold_171775 (46162-45995) | |
| 420-557, gnl|panTro1|chr16 (82420743-82420910) | |
| 420-557, gnl|rheMac2|chr7 (63372567-63372400) | |
| 420-557, gnl|rn3|chr1 (138193121-138193287) | |
| 420-557, gnl|tetNig1|chrUn_random (32885500-32885653) | |
| 420-557, gnl|xenTro1|scaffold_613 (118347-118182) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 240-1080, gnl|bosTau2|chr23 (29186637-29185817) | |
| 240-1080, gnl|Hg17|chr6 (22677763-22678636) | |
| 240-1080, gnl|Mm7|chr13 (26135656-26134696) | |
| 420-557, gnl|bosTau2|chr21 (18079939-18080076) | |
| 420-557, gnl|canFam2|chr3 (57786514-57786681) | |
| 420-557, gnl|danRer3|chr22 (18494376-18494232) | |
| 420-557, gnl|dasNov1|scaffold_19558 (40355-40188) | |
| 420-557, gnl|echTel1|scaffold_40041 (825-991) | |
| 420-557, gnl|fr1|chrUn (220589581-220589433) | |
| 420-557, gnl|galGal2|chr10 (11840165-11840313) | |
| 420-557, gnl|hg17|chr15 (81617656-81617823) | |
| 420-557, gnl|Hg17|chr15 (81617796-81617659) | |
| 420-557, gnl|loxAfr1|scaffold_2905 (127971-128137) | |
| 420-557, gnl|mm7|chr7 (77773570-77773736) | |
| 420-557, gnl|Mm7|chr7 (77773710-77773573) | |
| 420-557, gnl|monDom2|scaffold_45 (1999835-1999994) | |
| 420-557, gnl|oryCun1|scaffold_171775 (46162-45995) | |
| 420-557, gnl|panTro1|chr16 (82420743-82420910) | |
| 420-557, gnl|rheMac2|chr7 (63372567-63372400) | |
| 420-557, gnl|rn3|chr1 (138193121-138193287) | |
| 420-557, gnl|tetNig1|chrUn_random (32885500-32885653) | |
| 420-557, gnl|xenTro1|scaffold_613 (118347-118182) |
| Expressed library(ies): 5 entry(ies) | More info |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
| nje (0.16592) | |
| pty (0.142714) | |
| nmm (0.132802) | |
| cly (0.120642) | |
| med (0.116252) |
| Expressed library(ies): 5 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| nje (0.16592) | |
| pty (0.142714) | |
| nmm (0.132802) | |
| cly (0.120642) | |
| med (0.116252) |