Ss1.1-Pig4-TMW8054H15.3
|
ACTGAGCCTGGAAGTGCTGGGGTAAATTAGAGAGAAGGCAAGATGGCGGACGTGTTGGAT
CTTCATGAGGCCGGGGGCGAGGATTTCGCGATGGATGAGGATGGGGACGAGAGCATCCAC
AAACTGAAAGAGAAAGCGAAGAAACGAAAGGGCCGTGGCTTTGGCTCCGAAGAGGGGTCT
CGAGCGCGGATGCGTGAAGATTATGACAGCGTGGAGCAGGATGGCGATGAACCCGGACCA
CAACGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTCCATGAGGAAGCCACGGAA
GAAGATATCCATGATAAATTTGCGGAGTATGGGGAAATAAAAAACATCCACCTCAACCTG
GACAGGCGTACGGGATATCTAAAGGGGTATACTCTAGTTGAGTATGAAACATACAAGGAG
GCCCAGGCTGCTATGGAGGGGCTCAATGGTCAGGATTTGATGGGACAGCCGATCAGCGTG
GACTGGTGTTTTGTTCGGGGTCCACCCAAGGGCAAGAGGAGAGGTGGCCGAAGACGCAGC
AGGAGTCCAGACCGGAGGCGTCGTTGACCCATCCTCTGTTGTGTTGTCCGGCGATTCCAT
TTGACCATGTAGACTGGAAGAAATGGGGCTGGTGCAGCACTGTTTATATTTAATCTCTTA
CCTTGCCTGCTTAGTATTTTTTTGAGTTATGAATAAATGGCCTGTTTTTGTTTTCTACAT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ACTGAGCCTGGAAGTGCTGGGGTAAATTAGAGAGAAGGCAAGATGGCGGACGTGTTGGAT
CTTCATGAGGCCGGGGGCGAGGATTTCGCGATGGATGAGGATGGGGACGAGAGCATCCAC
AAACTGAAAGAGAAAGCGAAGAAACGAAAGGGCCGTGGCTTTGGCTCCGAAGAGGGGTCT
CGAGCGCGGATGCGTGAAGATTATGACAGCGTGGAGCAGGATGGCGATGAACCCGGACCA
CAACGCTCTGTTGAAGGTTGGATTCTCTTTGTCACTGGAGTCCATGAGGAAGCCACGGAA
GAAGATATCCATGATAAATTTGCGGAGTATGGGGAAATAAAAAACATCCACCTCAACCTG
GACAGGCGTACGGGATATCTAAAGGGGTATACTCTAGTTGAGTATGAAACATACAAGGAG
GCCCAGGCTGCTATGGAGGGGCTCAATGGTCAGGATTTGATGGGACAGCCGATCAGCGTG
GACTGGTGTTTTGTTCGGGGTCCACCCAAGGGCAAGAGGAGAGGTGGCCGAAGACGCAGC
AGGAGTCCAGACCGGAGGCGTCGTTGACCCATCCTCTGTTGTGTTGTCCGGCGATTCCAT
TTGACCATGTAGACTGGAAGAAATGGGGCTGGTGCAGCACTGTTTATATTTAATCTCTTA
CCTTGCCTGCTTAGTATTTTTTTGAGTTATGAATAAATGGCCTGTTTTTGTTTTCTACAT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
|
|
383-521, gnl|bosTau2|chr3 (15429017-15429155) |
|
383-521, gnl|canFam2|chr17 (61804559-61804456) |
|
383-521, gnl|danRer3|chr15 (27575285-27575182) |
|
383-521, gnl|dasNov1|scaffold_6273 (20964-21060) |
|
383-521, gnl|echTel1|scaffold_168081 (2588-2694) |
|
383-521, gnl|fr1|chrUn (199405048-199404945) |
|
383-521, gnl|hg17|chr1 (142997953-142998056) |
|
383-521, gnl|Hg17|chr1 (142997958-142998096) |
|
383-521, gnl|loxAfr1|scaffold_16643 (19577-19680) |
|
383-521, gnl|mm7|chr3 (96505375-96505478) |
|
383-521, gnl|Mm7|chr3 (96505380-96505518) |
|
383-521, gnl|monDom2|scaffold_44 (2389070-2388967) |
|
383-521, gnl|panTro1|chr1_random (17615031-17614928) |
|
383-521, gnl|rheMac2|chr1 (126132149-126132046) |
|
383-521, gnl|rn3|chr2 (191394075-191394178) |
|
383-521, gnl|tetNig1|chr8 (1618529-1618632) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
383-521, gnl|bosTau2|chr3 (15429017-15429155) |
|
383-521, gnl|canFam2|chr17 (61804559-61804456) |
|
383-521, gnl|danRer3|chr15 (27575285-27575182) |
|
383-521, gnl|dasNov1|scaffold_6273 (20964-21060) |
|
383-521, gnl|echTel1|scaffold_168081 (2588-2694) |
|
383-521, gnl|fr1|chrUn (199405048-199404945) |
|
383-521, gnl|hg17|chr1 (142997953-142998056) |
|
383-521, gnl|Hg17|chr1 (142997958-142998096) |
|
383-521, gnl|loxAfr1|scaffold_16643 (19577-19680) |
|
383-521, gnl|mm7|chr3 (96505375-96505478) |
|
383-521, gnl|Mm7|chr3 (96505380-96505518) |
|
383-521, gnl|monDom2|scaffold_44 (2389070-2388967) |
|
383-521, gnl|panTro1|chr1_random (17615031-17614928) |
|
383-521, gnl|rheMac2|chr1 (126132149-126132046) |
|
383-521, gnl|rn3|chr2 (191394075-191394178) |
|
383-521, gnl|tetNig1|chr8 (1618529-1618632) |
|
nlu (0.766724) |
|
lnt (0.569233) |
|
thg (0.507164) |
|
cst (0.420109) |
|
hea (0.408998) |
|
mga (0.32041) |
|
sme (0.305437) |
|
ski (0.29347) |
|
che (0.272628) |
|
bla (0.248694) |
|
eep (0.245128) |
|
cbe (0.239234) |
|
ece (0.229305) |
|
jca (0.22792) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
aor (0.195274) |
|
col (0.195008) |
|
fty (0.17584) |
|
ill (0.175593) |
|
sin (0.174948) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
nco (0.161734) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ova (0.129132) |
|
sug (0.127291) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
ldo (0.0970026) |
|
nlu (0.766724) |
|
lnt (0.569233) |
|
thg (0.507164) |
|
cst (0.420109) |
|
hea (0.408998) |
|
mga (0.32041) |
|
sme (0.305437) |
|
ski (0.29347) |
|
che (0.272628) |
|
bla (0.248694) |
|
eep (0.245128) |
|
cbe (0.239234) |
|
ece (0.229305) |
|
jca (0.22792) |
|
nms (0.213858) |
|
fcc (0.197785) |
|
eje (0.197668) |
|
aor (0.195274) |
|
col (0.195008) |
|
fty (0.17584) |
|
ill (0.175593) |
|
sin (0.174948) |
|
mcp (0.170648) |
|
eye (0.170503) |
|
nco (0.161734) |
|
cag (0.151194) |
|
hlv (0.139256) |
|
nca (0.136874) |
|
ssp (0.13552) |
|
ute (0.132784) |
|
cov (0.132153) |
|
ova (0.129132) |
|
sug (0.127291) |
|
eru (0.120048) |
|
ebs (0.118301) |
|
med (0.116252) |
|
cty (0.10408) |
|
nbm (0.0993246) |
|
ldo (0.0970026) |
