Non-Coding RNA Search

Ss1.1-Pig4-TMW8054H22.3

Sequence:


               
               TTTTTGGGATTTAGAAAGATTAGTATTCTTGTGCCAGTTATTTCCATTTCTCTTTGTCGT
TAAAGTCTAACAGAATTTGTCTTGGAGTTAACATTGTTCTGGGTCAATTTTTTCAGCTAC
CTGGTGTTTTTCTGCTATTCTTCAGCACCTTTTTACATTTTTTTGAGGCTATGCTTCCTT
AGGCATCTTGAAATTTTAGTCTTCATTTATGACATGATTTTTTCATTTTCTCTTATTCCC
TCATTGAGTTCAATCAACTCTTCTTTTTGTCCTTTTTTTTTTTTAAGTTTCTGATTCAAG
GCTACTAAAACCCACATATTAATAATTTTGCTTCTTTTCTTTCAGGTTTCTGTATTAAAA
TGTTCTACATTAAGCCAGTTAAATACAAAGGTTCTATCAAGAAGGGAGAAAAACTGGGAA
CTCTCCTGCCCTTGCAGAAAGTGTATCCTGGCATACAATCTCATGTACATATTGAAAACT
GTGACTTGACTGATCCTACTGTGTACCTATAAATGGAAGACAACCAGATCTTCTAAAGAG
AGAGCCACAGTCTCAAAATCTGGGTACAAATCCTGCTGTTCAAGAAATCTGTGTTCAAAA
AGAAACAGGATAAATGCAAGAAAGAAAACCGCATTTTGATTTCAACTTATTCCCACGCTG
ATGTTTTGAATGTCAATTTGGTTTCTCAGGACTGATCTTTCTGTAACCTATGGGTTCTGG
GGTGTGTCTTGTCTTAGGATTTCTCAGCCCTGAATACAAAGAATAAACAAACATAGGAAT
TCAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTGGGATTTAGAAAGATTAGTATTCTTGTGCCAGTTATTTCCATTTCTCTTTGTCGT
TAAAGTCTAACAGAATTTGTCTTGGAGTTAACATTGTTCTGGGTCAATTTTTTCAGCTAC
CTGGTGTTTTTCTGCTATTCTTCAGCACCTTTTTACATTTTTTTGAGGCTATGCTTCCTT
AGGCATCTTGAAATTTTAGTCTTCATTTATGACATGATTTTTTCATTTTCTCTTATTCCC
TCATTGAGTTCAATCAACTCTTCTTTTTGTCCTTTTTTTTTTTTAAGTTTCTGATTCAAG
GCTACTAAAACCCACATATTAATAATTTTGCTTCTTTTCTTTCAGGTTTCTGTATTAAAA
TGTTCTACATTAAGCCAGTTAAATACAAAGGTTCTATCAAGAAGGGAGAAAAACTGGGAA
CTCTCCTGCCCTTGCAGAAAGTGTATCCTGGCATACAATCTCATGTACATATTGAAAACT
GTGACTTGACTGATCCTACTGTGTACCTATAAATGGAAGACAACCAGATCTTCTAAAGAG
AGAGCCACAGTCTCAAAATCTGGGTACAAATCCTGCTGTTCAAGAAATCTGTGTTCAAAA
AGAAACAGGATAAATGCAAGAAAGAAAACCGCATTTTGATTTCAACTTATTCCCACGCTG
ATGTTTTGAATGTCAATTTGGTTTCTCAGGACTGATCTTTCTGTAACCTATGGGTTCTGG
GGTGTGTCTTGTCTTAGGATTTCTCAGCCCTGAATACAAAGAATAAACAAACATAGGAAT
TCAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|258407|gb|AAB23844.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|258407|gb|AAB23844.1|

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-785, gnl|bosTau2|chr7 (31653222-31654019)
               

               
               2-785, gnl|Hg17|chr5 (135311453-135310496)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-785, gnl|bosTau2|chr7 (31653222-31654019)
               

               
               2-785, gnl|Hg17|chr5 (135311453-135310496)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               fli (0.202881)
               

               
               cli (0.152812)
               

               
               liv (0.146284)
               

               
               eje (0.0988338)

Expressed library(ies): 4 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fli (0.202881)
               

               
               cli (0.152812)
               

               
               liv (0.146284)
               

               
               eje (0.0988338)

	2-785, gnl\|bosTau2\|chr7 (31653222-31654019)
	2-785, gnl\|Hg17\|chr5 (135311453-135310496)