Non-Coding RNA Search

Ss1.1-Pig4-TMW8054L16.3

Sequence:


               
               GACTTTTTTCTCATCTTTGTTTCTTCCATCATCAGCAACTCTATTGAAAGATATATCTAA
GTGCAGATAATATTTTATGGAAAAAAATTAACAGAATTTCATATTCAGAATTGCTGATAT
GAACTGTTTTATTTGAGGCCTTTATCCTGGGAAATAGTTTTAGGGACTTCAATGTCTGGC
TTAAATGGTGGAGCTTACTATTGACTCTCAATTTTGCTTCCCATTTGAGGTCAAGGAATG
TACTGACACTTTCACTTAATACTTATACCTCTCTGTGACCAAGAGTTTTAATTTTATCTG
TTGTTTTCTTTTGTTGTAGATGTACAGCATTACTGAATAGATTGATTAATGCTTTACCTC
TTCTCATTGTTCTTATTCTCCATCTTGTAAATATACTAAAAACAGTATAAGGTTCACAAA
ATCAGATGGATGATAGGACCTAGAAGAGAAACAAAGGGCCTGATAACTCACATAAATGGA
AAATCGACCCTGGAATAATTGACAGCATATTCAAATATCTTAGTGCAGTGTTAACTCCAA
CTAAGCAGAATAGTATCAGTAAATCAACATGAATCTAAACACTCTAATGAAAAGGGAACA
AGGTTTTCTTTTTTTCTTACATGCTTGAGGACCTATAGCAGAAAAGGGAACATTCTGTCA
AACACCTCACATTTATAGATATCTGGGTATTGGCTATTGTGAAGAAAAAAAGGTATAAAC
GATGAACTACCTCTCATTTGCATACTCTGAAGCCTTGTAGTTCCAGCCATTGGATTCTAA
GGCAATTTACATTTATTTCTCTGTCCTTCTTGAGAGAAAACAAAAATCTTATTTCTTCAA
CCAATTAAAATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GACTTTTTTCTCATCTTTGTTTCTTCCATCATCAGCAACTCTATTGAAAGATATATCTAA
GTGCAGATAATATTTTATGGAAAAAAATTAACAGAATTTCATATTCAGAATTGCTGATAT
GAACTGTTTTATTTGAGGCCTTTATCCTGGGAAATAGTTTTAGGGACTTCAATGTCTGGC
TTAAATGGTGGAGCTTACTATTGACTCTCAATTTTGCTTCCCATTTGAGGTCAAGGAATG
TACTGACACTTTCACTTAATACTTATACCTCTCTGTGACCAAGAGTTTTAATTTTATCTG
TTGTTTTCTTTTGTTGTAGATGTACAGCATTACTGAATAGATTGATTAATGCTTTACCTC
TTCTCATTGTTCTTATTCTCCATCTTGTAAATATACTAAAAACAGTATAAGGTTCACAAA
ATCAGATGGATGATAGGACCTAGAAGAGAAACAAAGGGCCTGATAACTCACATAAATGGA
AAATCGACCCTGGAATAATTGACAGCATATTCAAATATCTTAGTGCAGTGTTAACTCCAA
CTAAGCAGAATAGTATCAGTAAATCAACATGAATCTAAACACTCTAATGAAAAGGGAACA
AGGTTTTCTTTTTTTCTTACATGCTTGAGGACCTATAGCAGAAAAGGGAACATTCTGTCA
AACACCTCACATTTATAGATATCTGGGTATTGGCTATTGTGAAGAAAAAAAGGTATAAAC
GATGAACTACCTCTCATTTGCATACTCTGAAGCCTTGTAGTTCCAGCCATTGGATTCTAA
GGCAATTTACATTTATTTCTCTGTCCTTCTTGAGAGAAAACAAAAATCTTATTTCTTCAA
CCAATTAAAATT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-852, gnl|bosTau2|chr4 (3180345-3179511)
               

               
               2-852, gnl|Hg17|chr7 (96240426-96239623)
               

               
               2-852, gnl|Mm7|chr6 (6775432-6774186)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-852, gnl|bosTau2|chr4 (3180345-3179511)
               

               
               2-852, gnl|Hg17|chr7 (96240426-96239623)
               

               
               2-852, gnl|Mm7|chr6 (6775432-6774186)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	2-852, gnl\|bosTau2\|chr4 (3180345-3179511)
	2-852, gnl\|Hg17\|chr7 (96240426-96239623)
	2-852, gnl\|Mm7\|chr6 (6775432-6774186)