Non-Coding RNA Search

Ss1.1-Pig4-TMW8054N19.5

Sequence:


               
               CATCAAAGAGCCCGCTGATGAGTTGGAGGCTGTGAATATTTTAGGTGAGGTGGGGCCTCA
TCCTGGGCCACTGCGGTGGCAGCCGCCACCACCGCCCCCCCGACCCCCAAGGCTGGCAAG
AGGCGGTCATTTGCTGAGAGAAATGGGATGCACTGAGAGAGAAAAAAAAAAAAAAGAAAC
TTTTAAAAACATAATTAAATGTAAAAGCAAGCGCTCCTATGTACACATGTTTATGGTTCC
TGTTTATTGCTGCTTTAGCCCACCTCAGCTTAGTGGCCACCCCTGGCTGCCAGCAGAAGG
GCCAGCGGCCCGGGACAGAGGGACGGGCGGGGAGACTCCACGAGCAGACCCAGAAAACTC
CAACTTGCTTTTCCTGCTTGAAGAAAAGGTGAAGGTTCCTAGGATTCCAACACCACATAT
TTGGGGCGGGTAGTGAGTAGGAGCTTCCAGACACGGAACGTGGGCGGGGGTTGGACTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATCAAAGAGCCCGCTGATGAGTTGGAGGCTGTGAATATTTTAGGTGAGGTGGGGCCTCA
TCCTGGGCCACTGCGGTGGCAGCCGCCACCACCGCCCCCCCGACCCCCAAGGCTGGCAAG
AGGCGGTCATTTGCTGAGAGAAATGGGATGCACTGAGAGAGAAAAAAAAAAAAAAGAAAC
TTTTAAAAACATAATTAAATGTAAAAGCAAGCGCTCCTATGTACACATGTTTATGGTTCC
TGTTTATTGCTGCTTTAGCCCACCTCAGCTTAGTGGCCACCCCTGGCTGCCAGCAGAAGG
GCCAGCGGCCCGGGACAGAGGGACGGGCGGGGAGACTCCACGAGCAGACCCAGAAAACTC
CAACTTGCTTTTCCTGCTTGAAGAAAAGGTGAAGGTTCCTAGGATTCCAACACCACATAT
TTGGGGCGGGTAGTGAGTAGGAGCTTCCAGACACGGAACGTGGGCGGGGGTTGGACTGCT

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               104-445, gnl|bosTau2|chr3 (72304770-72304430)
               

               
               104-445, gnl|Hg17|chr1 (41644884-41644518)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               104-445, gnl|bosTau2|chr3 (72304770-72304430)
               

               
               104-445, gnl|Hg17|chr1 (41644884-41644518)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               med (0.116252)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               med (0.116252)

	104-445, gnl\|bosTau2\|chr3 (72304770-72304430)
	104-445, gnl\|Hg17\|chr1 (41644884-41644518)