Non-Coding RNA Search

Ss1.1-Pig4-TMW8055E19.3

Sequence:


               
               GGAGAAGCGCCAGGCTGACCCAGGTTTCTTTTGCAGGAAGATCGTGGAGGGCGTCTCCCA
GCCCATCTGGACTTTTTGTGATGAGCAAGCTTTTCCGATGAACATTCAGAAACATAAATA
AGTTAAAACACTGGACCCCTCCGATGGCTTCACATTGGCATAGATCAGAAGAGTCCTTCG
AGGGATGGAAGAAGAGCTTGGCGATCATCAGATTCTCTCGTCCACATGTGTAAAAAAACA
TACAGTGATATTCAAGCGCTGGACTAGGTGGGTGTTAAGCGCTCTTGGCTCTGAAGTTCT
GGGATTCCACTTAATTCCACACAAGTTGAGAAGCTCACAATCTAGTTAGGGGAGCAGATT
GGTTTATTTGTTCATGCATTAACCCAACAAATGCTTATGGAGTTCCTGCTATGTTCCTGG
CATTGTCTCAGATGCTGGGGAACATAAACACATCATTACGGTGCTATGTGAGAAGTACTT
CGGGAGAGTTCCCTTACAATGTGTTAGGGGCACACAGCAGACGAAGCAGCTAATCCTGTT
TGCAGGTGTAGGGGGTCACGGAAGGGGTCAGAAAGAAGGCTCATTTGAATAGGGCCTTGA
GGGATAATAAGAGTTCGCTTGGAGTTCCCTGGTGGCTCAGTGGATCTGGTATCCCTGCTG
TGGCTTGAGTCACTGCTATGGCATGGTTTTGATCCCTGGAACTTCCACATGCTGTGGGTA
CAGCCAAAAAAAAAAAATGGGATTTTTTAGGCAGCAAATAGAGGGAAATAGAGCTTATGC
TAAATTGGGAATTATTTTTGGAGAGGCCTACATGTGCTATGAGGGAAGATGGAATAAACA
GGTTTTTTTTTTTTTTTTTTAATAAACTCTTGTCCTCATCCCAGCCACAAAAATCAGAAT
AAGAAGTGAGTTCAAATGTTTAAACTCACAAAGTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGAAGCGCCAGGCTGACCCAGGTTTCTTTTGCAGGAAGATCGTGGAGGGCGTCTCCCA
GCCCATCTGGACTTTTTGTGATGAGCAAGCTTTTCCGATGAACATTCAGAAACATAAATA
AGTTAAAACACTGGACCCCTCCGATGGCTTCACATTGGCATAGATCAGAAGAGTCCTTCG
AGGGATGGAAGAAGAGCTTGGCGATCATCAGATTCTCTCGTCCACATGTGTAAAAAAACA
TACAGTGATATTCAAGCGCTGGACTAGGTGGGTGTTAAGCGCTCTTGGCTCTGAAGTTCT
GGGATTCCACTTAATTCCACACAAGTTGAGAAGCTCACAATCTAGTTAGGGGAGCAGATT
GGTTTATTTGTTCATGCATTAACCCAACAAATGCTTATGGAGTTCCTGCTATGTTCCTGG
CATTGTCTCAGATGCTGGGGAACATAAACACATCATTACGGTGCTATGTGAGAAGTACTT
CGGGAGAGTTCCCTTACAATGTGTTAGGGGCACACAGCAGACGAAGCAGCTAATCCTGTT
TGCAGGTGTAGGGGGTCACGGAAGGGGTCAGAAAGAAGGCTCATTTGAATAGGGCCTTGA
GGGATAATAAGAGTTCGCTTGGAGTTCCCTGGTGGCTCAGTGGATCTGGTATCCCTGCTG
TGGCTTGAGTCACTGCTATGGCATGGTTTTGATCCCTGGAACTTCCACATGCTGTGGGTA
CAGCCAAAAAAAAAAAATGGGATTTTTTAGGCAGCAAATAGAGGGAAATAGAGCTTATGC
TAAATTGGGAATTATTTTTGGAGAGGCCTACATGTGCTATGAGGGAAGATGGAATAAACA
GGTTTTTTTTTTTTTTTTTTAATAAACTCTTGTCCTCATCCCAGCCACAAAAATCAGAAT
AAGAAGTGAGTTCAAATGTTTAAACTCACAAAGTTA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               53-616, gnl|bosTau2|chr3 (8968901-8968346)
               

               
               53-616, gnl|Hg17|chr1 (151671592-151670854)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-616, gnl|bosTau2|chr3 (8968901-8968346)
               

               
               53-616, gnl|Hg17|chr1 (151671592-151670854)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cte (0.29274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cte (0.29274)

	53-616, gnl\|bosTau2\|chr3 (8968901-8968346)
	53-616, gnl\|Hg17\|chr1 (151671592-151670854)