Non-Coding RNA Search

Ss1.1-Pig4-TMW8055H03.3

Sequence:


               
               GGACAAGGAAGGGCTCTTAAGCTGTTCAGTTTTAAAGGATTCATTTCTAAAAAAAAGCGT
AAGGAATATGACTTTTCTCATAGGTGTATAGGATACCTGCCTATATTACTATGTGTATCC
CTTGAGAGGGAACCAGGATCCTGCCCCAAGGCTGTACTGTTGTTGCTTGACTGTTCCTCC
CTTCCCTGATCAGCAACTGTCTGAGCCTGTCCCCAGGAACTCAGGGAAGGTCATGGTACC
TCAACAAGAAATGGGGGACACAGAAAGGCTTTTGTAGGAGCGCCACAGGGGCCTGCTCGG
TTTCAGCTTTACTCTTAAGTGAAATGTTTAATGATAGAAGTAATGACAACCATAATTTTC
TTGTACCTTACTTTGAAAAAAATGCTTCTTTTTAATGTTGCACCATCAGATAGGACATTT
ACTGTAGATTCTTGATAAAGATGCTTTTATTGAGAGTGGAGGGTCATTTAAGAATGACTC
TTTGTATTTCTAAGTGGCTAAAGTGTATTTTTATTTTTAATCAATAATTGGAATTTATCT
TTATTGAATTTTCTATCTATATTACTTGACATTTTTATGTTTTTTCTCCAACATTTTTGA
ATATAGTGAGATATATAAAATGATTTTCCACTGTGAAATTACCCTTGTATCCCTGAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGACAAGGAAGGGCTCTTAAGCTGTTCAGTTTTAAAGGATTCATTTCTAAAAAAAAGCGT
AAGGAATATGACTTTTCTCATAGGTGTATAGGATACCTGCCTATATTACTATGTGTATCC
CTTGAGAGGGAACCAGGATCCTGCCCCAAGGCTGTACTGTTGTTGCTTGACTGTTCCTCC
CTTCCCTGATCAGCAACTGTCTGAGCCTGTCCCCAGGAACTCAGGGAAGGTCATGGTACC
TCAACAAGAAATGGGGGACACAGAAAGGCTTTTGTAGGAGCGCCACAGGGGCCTGCTCGG
TTTCAGCTTTACTCTTAAGTGAAATGTTTAATGATAGAAGTAATGACAACCATAATTTTC
TTGTACCTTACTTTGAAAAAAATGCTTCTTTTTAATGTTGCACCATCAGATAGGACATTT
ACTGTAGATTCTTGATAAAGATGCTTTTATTGAGAGTGGAGGGTCATTTAAGAATGACTC
TTTGTATTTCTAAGTGGCTAAAGTGTATTTTTATTTTTAATCAATAATTGGAATTTATCT
TTATTGAATTTTCTATCTATATTACTTGACATTTTTATGTTTTTTCTCCAACATTTTTGA
ATATAGTGAGATATATAAAATGATTTTCCACTGTGAAATTACCCTTGTATCCCTGAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               103-305, gnl|bosTau2|chr15 (31032852-31033068)
               


               
               306-658, gnl|bosTau2|chr29 (6405361-6405020)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               103-305, gnl|bosTau2|chr15 (31032852-31033068)
               


               
               306-658, gnl|bosTau2|chr29 (6405361-6405020)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ctl (0.153069)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ctl (0.153069)

	103-305, gnl\|bosTau2\|chr15 (31032852-31033068)

	306-658, gnl\|bosTau2\|chr29 (6405361-6405020)