Non-Coding RNA Search

Ss1.1-Pig4-TMW8055I15.5

Sequence:


               
               AAAAGATTCACTAATTGGTACTTAACCCTACCCCAGCCCTCACTTTATATATTATTTGGA
CATAGCTACACTACTTTTTCATAATTATTTCACTTTAGTTAAAATTATATTCACTGTTTA
TTGAACATATATTTCATTACTTAGTTTATTCATGCTGATTTCCTATTTAAAAATATGATC
CTCTCCAGACCATTTATGTGAAGTCAGGGTCCAGCTGATGTGAACTATAAAATTACTATA
TTTTGAGACAAAATATGAAAAGTCCTAACATACATTCTATGGCATAAAAATTACATTGTT
ACAAAATAGTATCAATTTGTTCACTTAAGAAATTTTTTATAAATTGATTTCAAATATACA
GTGCATAAGTAACTGCCTTAAACTTAGTCTCTGCTGTGGAATGCAAAACTTTTGAAAATC
AAAATATCTTATAAAATATGTCTGTTGTCTTTTATACATGGATAGCAATAGCTTTATATA
AAGGGTGCAATCTTGTTAGGTCAAGTGAAAAATTGCCACCAAAGACAAATAAATAAACAG
CACACTATTGAGTTATTTCCCCTAACAACTATTCATGGCTTCATTACTTAAGAAACACAC
ACACTGAGAGATGGTTTGCAATGTTTAATGCATGTGAATATTATTTTTACTGTGTTTTTA
AATAAGATTCCCTCTAAAGGTATTGTCTGCCTTTGTTTTGCATAATCAAATGCATCTAAC
TGTGAATTTTATATAAAATTACATTATACAGAATATATATGTATTTACTGACCTTATTTT
CTGTTCAAAATTAACAGGTCATGCTGAAAACTGCTCAAATGATTTTATTTTTTATAGTAT
AAGAAATAAAATATATTACCCTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGATTCACTAATTGGTACTTAACCCTACCCCAGCCCTCACTTTATATATTATTTGGA
CATAGCTACACTACTTTTTCATAATTATTTCACTTTAGTTAAAATTATATTCACTGTTTA
TTGAACATATATTTCATTACTTAGTTTATTCATGCTGATTTCCTATTTAAAAATATGATC
CTCTCCAGACCATTTATGTGAAGTCAGGGTCCAGCTGATGTGAACTATAAAATTACTATA
TTTTGAGACAAAATATGAAAAGTCCTAACATACATTCTATGGCATAAAAATTACATTGTT
ACAAAATAGTATCAATTTGTTCACTTAAGAAATTTTTTATAAATTGATTTCAAATATACA
GTGCATAAGTAACTGCCTTAAACTTAGTCTCTGCTGTGGAATGCAAAACTTTTGAAAATC
AAAATATCTTATAAAATATGTCTGTTGTCTTTTATACATGGATAGCAATAGCTTTATATA
AAGGGTGCAATCTTGTTAGGTCAAGTGAAAAATTGCCACCAAAGACAAATAAATAAACAG
CACACTATTGAGTTATTTCCCCTAACAACTATTCATGGCTTCATTACTTAAGAAACACAC
ACACTGAGAGATGGTTTGCAATGTTTAATGCATGTGAATATTATTTTTACTGTGTTTTTA
AATAAGATTCCCTCTAAAGGTATTGTCTGCCTTTGTTTTGCATAATCAAATGCATCTAAC
TGTGAATTTTATATAAAATTACATTATACAGAATATATATGTATTTACTGACCTTATTTT
CTGTTCAAAATTAACAGGTCATGCTGAAAACTGCTCAAATGATTTTATTTTTTATAGTAT
AAGAAATAAAATATATTACCCTCA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-862, gnl|bosTau2|chr23 (12454687-12455566)
               

               
               2-862, gnl|Hg17|chr2 (188155413-188154474)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-862, gnl|bosTau2|chr23 (12454687-12455566)
               

               
               2-862, gnl|Hg17|chr2 (188155413-188154474)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               eru (0.120048)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               eru (0.120048)

	2-862, gnl\|bosTau2\|chr23 (12454687-12455566)
	2-862, gnl\|Hg17\|chr2 (188155413-188154474)