Non-Coding RNA Search

Ss1.1-Pig4-TMW8055L18.5

Sequence:


               
               GTCGATGGAAACATTGTCAATGAGGTAAAGCTGCTGAGAAAAGAAAGCCGAAACATGAAC
TCGCGTGTCACGCAACTCTACATGCAACTGCTACATGAGATTATCCGCAAGAGGGATAAT
TCGCTTGAACTTTCCCAGCTGGAAAATAAAATCCTCAATGTCACCACGGAAATGTTGAAG
ATGGCAACAAGGTACAGGGAACTCGAGGTGAAATACGCGTCCTTGACTGATCTGGTCAAT
AACCAGTCTGTGATGATCACTCTGTTGGAAGAACAGTGCTTGAGGATATTTTCCCGACAA
GACCCCCATCTGTCTCCTCCTCTTGTCCAGGTAGTGCCACAGCATATTCCTAACAGTCAT
CAGTACACTCCCGGCCTGCTGGGAGGCAATGAGATACAGAGGGATCCAGGTTATCCCAGA
GATTTAATGCCCCCACCTGACCTGGCAACTCCTCCCACCAAAAGCCCTTTCAAGATCCCA
CCGGTAACTTTCATCAACGAAGGTGAGTTACTCCTCCTGTTAACGATGGAAGTACGAGGT
TAATGTGTTGTGTGGTTTATGGATTGATGCTCCTAATACATGGCTGTTCTTCATTTTGGG
GATGTGATTATACATGAACATTAAAGTTTCTATTTTTGTTTCCTCCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTCGATGGAAACATTGTCAATGAGGTAAAGCTGCTGAGAAAAGAAAGCCGAAACATGAAC
TCGCGTGTCACGCAACTCTACATGCAACTGCTACATGAGATTATCCGCAAGAGGGATAAT
TCGCTTGAACTTTCCCAGCTGGAAAATAAAATCCTCAATGTCACCACGGAAATGTTGAAG
ATGGCAACAAGGTACAGGGAACTCGAGGTGAAATACGCGTCCTTGACTGATCTGGTCAAT
AACCAGTCTGTGATGATCACTCTGTTGGAAGAACAGTGCTTGAGGATATTTTCCCGACAA
GACCCCCATCTGTCTCCTCCTCTTGTCCAGGTAGTGCCACAGCATATTCCTAACAGTCAT
CAGTACACTCCCGGCCTGCTGGGAGGCAATGAGATACAGAGGGATCCAGGTTATCCCAGA
GATTTAATGCCCCCACCTGACCTGGCAACTCCTCCCACCAAAAGCCCTTTCAAGATCCCA
CCGGTAACTTTCATCAACGAAGGTGAGTTACTCCTCCTGTTAACGATGGAAGTACGAGGT
TAATGTGTTGTGTGGTTTATGGATTGATGCTCCTAATACATGGCTGTTCTTCATTTTGGG
GATGTGATTATACATGAACATTAAAGTTTCTATTTTTGTTTCCTCCAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|13386304|ref|NP_082609.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|13386304|ref|NP_082609.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-279, gnl|bosTau2|chr11 (74878586-74878864)
               

               
               1-279, gnl|Hg17|chr9 (126950231-126949953)
               

               
               1-279, gnl|Mm7|chr2 (33235860-33236138)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-279, gnl|bosTau2|chr11 (74878586-74878864)
               

               
               1-279, gnl|Hg17|chr9 (126950231-126949953)
               

               
               1-279, gnl|Mm7|chr2 (33235860-33236138)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               mas (0.210305)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               mas (0.210305)

	1-279, gnl\|bosTau2\|chr11 (74878586-74878864)
	1-279, gnl\|Hg17\|chr9 (126950231-126949953)
	1-279, gnl\|Mm7\|chr2 (33235860-33236138)