Non-Coding RNA Search

Ss1.1-Pig4-TMW8055M19.3

Sequence:


               
               TAGAATGAGCTCTCCCAGGGGTCTCCATTTTGGCTGTACCCTACACCCTGCAGGCTCCAA
TGCTGGGATGCCTCAGGCTAAGCAACCAACAGAGTAAGAACACAACCCCCACCCATTAGC
AGACAGGCTGCCTAAAGTCAGAGGCCAGAGCTGCCTGTAAGTACACTTCTTGACATGGCC
TTGCCCTCCAGAGGGACAAAACCCAGCTCCACCCACCAAAGGGCAGACACACTCTCTCCC
GCCAGGAAGCTTGCACAAGCCCCTGGACCAACCTCACCCACCAAGGGCGAGACACCAGAA
GAAGGGGGACTACAGTGCTACAGCCTGTGGACTGGAGACCAGAAACACAGAAAGGTAGAT
AAAATGAGACAGCTGAGAAATATGTTCCAGACAAAGGAACAAGATAAAACCTCAGAAGAA
CAACTAAGTGAAGTGGAGACAGGCAACCTGCTTGAAGAAGAATTCATTGTAATGGTAGTA
AAGATGATCCAAGATCTCAGAAAAAGAATCAAGGCACAGACTGAGAAGATACAAGAAATG
TTTAACAATGCTATACCAAAACATTGTGGGAACCACAAACCGAAAAAGTGCAGTAGACAC
AAATTTTAAAAAAAAGAAAAGGAAAAGAAATCCAAATCCAACACTACAGATAGCCATCAA
ATCACAACAACAAGAGGAAAGGAAGAAAAAGTCCAACATTAACAAACCCGAAATAAAATG
GCAGTATGTAAACGTATGCCAATAATTACCTTGAATGTAAATAGATTAAATGCTCCAGCC
AAAAGACACTGACTGGCTGAATGGCGACTAAAATAAGACCTGGATATATGCTGTCTACAA
GAGACCTGCTTCAGATCTGGGGACAAATGCAGACTGAAAGTGAGGGGATGGAAAACGATG
GTCTATGTGAATGGAAATCAAAAGAAAGCTGGAGTAGCAATACTCATATCAGACAAAATA
CAGTTTAAAATAGTGGTACAGGGGACAGAGAAGAACACTACCTAATGATCAAGAGGTCAC
TCTGAGAAGATGTAACAGTTGTAAATATATATGCACCCAACATAGGAACACCACATTATA
TAAGGCCACTGCTAACAACTCTAAAAGGAGAAATCATCAGTAACACAATAATAGTGGGGG
ACTTTAACACTTATATCAAGAGATCATCCAAAGAGAAAATAAAGAAACACAAGCTTTAAA
TGACACATTAGACCAGATAGACTTACTTGATGTTATAGAACATTCCATCCAAAAGCAGCT
GAATACACATTCTTCTCAAGTGCACATGGAACATTCTCCAGGATTGATCACATCTTGGGC
CACAAATCAAGCAGTAGTAAATTTAAGAAGACTGAAATCATACCAAGTATTTTTTCTGAC
CACAACACTATGAGACTAGAAATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAGAATGAGCTCTCCCAGGGGTCTCCATTTTGGCTGTACCCTACACCCTGCAGGCTCCAA
TGCTGGGATGCCTCAGGCTAAGCAACCAACAGAGTAAGAACACAACCCCCACCCATTAGC
AGACAGGCTGCCTAAAGTCAGAGGCCAGAGCTGCCTGTAAGTACACTTCTTGACATGGCC
TTGCCCTCCAGAGGGACAAAACCCAGCTCCACCCACCAAAGGGCAGACACACTCTCTCCC
GCCAGGAAGCTTGCACAAGCCCCTGGACCAACCTCACCCACCAAGGGCGAGACACCAGAA
GAAGGGGGACTACAGTGCTACAGCCTGTGGACTGGAGACCAGAAACACAGAAAGGTAGAT
AAAATGAGACAGCTGAGAAATATGTTCCAGACAAAGGAACAAGATAAAACCTCAGAAGAA
CAACTAAGTGAAGTGGAGACAGGCAACCTGCTTGAAGAAGAATTCATTGTAATGGTAGTA
AAGATGATCCAAGATCTCAGAAAAAGAATCAAGGCACAGACTGAGAAGATACAAGAAATG
TTTAACAATGCTATACCAAAACATTGTGGGAACCACAAACCGAAAAAGTGCAGTAGACAC
AAATTTTAAAAAAAAGAAAAGGAAAAGAAATCCAAATCCAACACTACAGATAGCCATCAA
ATCACAACAACAAGAGGAAAGGAAGAAAAAGTCCAACATTAACAAACCCGAAATAAAATG
GCAGTATGTAAACGTATGCCAATAATTACCTTGAATGTAAATAGATTAAATGCTCCAGCC
AAAAGACACTGACTGGCTGAATGGCGACTAAAATAAGACCTGGATATATGCTGTCTACAA
GAGACCTGCTTCAGATCTGGGGACAAATGCAGACTGAAAGTGAGGGGATGGAAAACGATG
GTCTATGTGAATGGAAATCAAAAGAAAGCTGGAGTAGCAATACTCATATCAGACAAAATA
CAGTTTAAAATAGTGGTACAGGGGACAGAGAAGAACACTACCTAATGATCAAGAGGTCAC
TCTGAGAAGATGTAACAGTTGTAAATATATATGCACCCAACATAGGAACACCACATTATA
TAAGGCCACTGCTAACAACTCTAAAAGGAGAAATCATCAGTAACACAATAATAGTGGGGG
ACTTTAACACTTATATCAAGAGATCATCCAAAGAGAAAATAAAGAAACACAAGCTTTAAA
TGACACATTAGACCAGATAGACTTACTTGATGTTATAGAACATTCCATCCAAAAGCAGCT
GAATACACATTCTTCTCAAGTGCACATGGAACATTCTCCAGGATTGATCACATCTTGGGC
CACAAATCAAGCAGTAGTAAATTTAAGAAGACTGAAATCATACCAAGTATTTTTTCTGAC
CACAACACTATGAGACTAGAAATA

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               6-533, gnl|bosTau2|chr1 (38388639-38388133)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-533, gnl|bosTau2|chr1 (38388639-38388133)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               liv (0.146284)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               liv (0.146284)