Non-Coding RNA Search

Ss1.1-Pig4-TMW8055O22.3

Sequence:


               
               CTCCACCATGTTGTCTGGTGTTTAAGAAGCACCCTTTATCCCCCGATGACCCTGGGGTTT
GGAATAAGATAGGAAGAAAGAGCATTTGGAAGAAAAGAAAGCATCTCTAAAGGGCCCCCC
GTGTGATGACTGGACAGTTCTGGCATTTCTGGGCCTTCCTGCGCTTGCTCTGTAATCAGA
ATTCAAAGAAGCAACCAGCGTGAGGCTCATGAAAGGAAATCTCCAACCACTGGTGGATTT
ACAAGTCATTAGAAGCAGCGAGTCGACCTGCATTTAATGAAAAGTCCGCGTTAAAAGAAG
GTGGCTTGAGAACCATGGTGCGTGGCCTGTGTCCAAAAACCTGAAGGAGAGAGGGAGGGC
ACCTTGGTTTTGCCTTAACAAGATCATTTGTGATCACCTAGGATAAAAAAGGACCCCAGC
CAACGAAGGCTGGGACACCACCTTCTGACACGAAAATCCAGGTCTGTGCAAAACCACGCA
ACCGGCTTCTGTTGGATAATTATTTTTATTTCCCCTCCCCTGCTCTGTCGGGCCCAACAA
TGACTTTATAGTTTAATTCACTGAAAAGTCCTTTCAACCGCAGTATTTTATAAAAGGATG
GGTTTTCTCAGTAATTGCATTTCCTTAGCCCAAACCGAAAGGAATCAAAAGATCCTAGGA
TGGCTTCCTTTCCCACATTACTTTTAAAAGCCTTCTTAAGTAATAAAGAGCCAGTGGCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTCCACCATGTTGTCTGGTGTTTAAGAAGCACCCTTTATCCCCCGATGACCCTGGGGTTT
GGAATAAGATAGGAAGAAAGAGCATTTGGAAGAAAAGAAAGCATCTCTAAAGGGCCCCCC
GTGTGATGACTGGACAGTTCTGGCATTTCTGGGCCTTCCTGCGCTTGCTCTGTAATCAGA
ATTCAAAGAAGCAACCAGCGTGAGGCTCATGAAAGGAAATCTCCAACCACTGGTGGATTT
ACAAGTCATTAGAAGCAGCGAGTCGACCTGCATTTAATGAAAAGTCCGCGTTAAAAGAAG
GTGGCTTGAGAACCATGGTGCGTGGCCTGTGTCCAAAAACCTGAAGGAGAGAGGGAGGGC
ACCTTGGTTTTGCCTTAACAAGATCATTTGTGATCACCTAGGATAAAAAAGGACCCCAGC
CAACGAAGGCTGGGACACCACCTTCTGACACGAAAATCCAGGTCTGTGCAAAACCACGCA
ACCGGCTTCTGTTGGATAATTATTTTTATTTCCCCTCCCCTGCTCTGTCGGGCCCAACAA
TGACTTTATAGTTTAATTCACTGAAAAGTCCTTTCAACCGCAGTATTTTATAAAAGGATG
GGTTTTCTCAGTAATTGCATTTCCTTAGCCCAAACCGAAAGGAATCAAAAGATCCTAGGA
TGGCTTCCTTTCCCACATTACTTTTAAAAGCCTTCTTAAGTAATAAAGAGCCAGTGGCCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-716, gnl|bosTau2|chr12 (4844929-4844232)
               

               
               1-716, gnl|Hg17|chr13 (41040357-41039645)
               

               
               1-716, gnl|Mm7|chr14 (73881871-73882456)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-716, gnl|bosTau2|chr12 (4844929-4844232)
               

               
               1-716, gnl|Hg17|chr13 (41040357-41039645)
               

               
               1-716, gnl|Mm7|chr14 (73881871-73882456)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ton (0.1755)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ton (0.1755)

	1-716, gnl\|bosTau2\|chr12 (4844929-4844232)
	1-716, gnl\|Hg17\|chr13 (41040357-41039645)
	1-716, gnl\|Mm7\|chr14 (73881871-73882456)