Non-Coding RNA Search

Ss1.1-Pig4-TMW8055P10.3

Sequence:


               
               GATGAGGAGGAAGAGGATGGGGAATCAGAAGCAGCTGTCTGGGGACCAAGTCCATCCCTT
CAGGCCCAGCGTGCCCTCCGCAGGGACCAGATGTATCAGCCTGGGAAGGGAACAGAGGGC
GGGGAAGCTGCGGAAGAGCGGGAAGAAGCTGAGCCCTGTCCCTTCCGAGTGGCCATCTAT
TTACCTGGAGAGAAGACACCACCCCCCTGGGCTCCTTCCCGGCTGCCCCTCCGCTTGCAA
CGGAGGCTCAAACCCGCAGAAACCCCCACCAGCCCTGCCAGGCATCAGGACCCAGAGCCT
CCCCGAAAGACCAGAAAGGTGCGCTTCTCTGAGAAGGTCTCCGTCCATCTCCTGGCGGTC
TGGGCTGGACCCGCCCAGGCTGCCCGCAGAGGCCCCTGGGAGCAGTTCGCCCGGGATCGG
AGCCGCTTCGCCCGACGCATTGCCCAGGCCGAAGAGGTCCTGGGCCCCTACCTCACCCCT
GCTGCCCGGGCTCGGGCCTGGGCACGCCTCGGGAATCCCTCCACTTCTCTGGCCACCCTA
GCTGCCCCTACCCAGACCTTACCAATGTCCCCCATCCTGGCCACGCCCTTGAGCCATGAT
GTGGCCTCCGCCCCCCATCCCTGGGTGTCTCCTGGCCTGGACCTCAGTGGGAGGCGTGGC
TGAGTTGAAGTAGTTTCCCTGTTATTAACTATTTATTTGGTTTTTTTTTTTTAAACTATT
TTCGTGTGTGAATTGATGTAAGGAATAAAGCTTTTTGTAGTGAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGAGGAGGAAGAGGATGGGGAATCAGAAGCAGCTGTCTGGGGACCAAGTCCATCCCTT
CAGGCCCAGCGTGCCCTCCGCAGGGACCAGATGTATCAGCCTGGGAAGGGAACAGAGGGC
GGGGAAGCTGCGGAAGAGCGGGAAGAAGCTGAGCCCTGTCCCTTCCGAGTGGCCATCTAT
TTACCTGGAGAGAAGACACCACCCCCCTGGGCTCCTTCCCGGCTGCCCCTCCGCTTGCAA
CGGAGGCTCAAACCCGCAGAAACCCCCACCAGCCCTGCCAGGCATCAGGACCCAGAGCCT
CCCCGAAAGACCAGAAAGGTGCGCTTCTCTGAGAAGGTCTCCGTCCATCTCCTGGCGGTC
TGGGCTGGACCCGCCCAGGCTGCCCGCAGAGGCCCCTGGGAGCAGTTCGCCCGGGATCGG
AGCCGCTTCGCCCGACGCATTGCCCAGGCCGAAGAGGTCCTGGGCCCCTACCTCACCCCT
GCTGCCCGGGCTCGGGCCTGGGCACGCCTCGGGAATCCCTCCACTTCTCTGGCCACCCTA
GCTGCCCCTACCCAGACCTTACCAATGTCCCCCATCCTGGCCACGCCCTTGAGCCATGAT
GTGGCCTCCGCCCCCCATCCCTGGGTGTCTCCTGGCCTGGACCTCAGTGGGAGGCGTGGC
TGAGTTGAAGTAGTTTCCCTGTTATTAACTATTTATTTGGTTTTTTTTTTTTAAACTATT
TTCGTGTGTGAATTGATGTAAGGAATAAAGCTTTTTGTAGTGAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               7-321, gnl|bosTau2|chr18 (48070734-48071039)
               

               
               7-321, gnl|Hg17|chr19 (54069653-54069970)
               

               
               7-321, gnl|Mm7|chr7 (41699739-41699464)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               7-321, gnl|bosTau2|chr18 (48070734-48071039)
               

               
               7-321, gnl|Hg17|chr19 (54069653-54069970)
               

               
               7-321, gnl|Mm7|chr7 (41699739-41699464)

Expressed library(ies): 6 entry(ies)

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Expressed library(ies): 6 entry(ies)

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               pla (0.267344)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               nmm (0.132802)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

Expressed library(ies): 6 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.267344)
               

               
               fty (0.17584)
               

               
               lnt (0.142308)
               

               
               nmm (0.132802)
               

               
               jej (0.0989218)
               

               
               eje (0.0988338)

	7-321, gnl\|bosTau2\|chr18 (48070734-48071039)
	7-321, gnl\|Hg17\|chr19 (54069653-54069970)
	7-321, gnl\|Mm7\|chr7 (41699739-41699464)

	pla (0.267344)
	fty (0.17584)
	lnt (0.142308)
	nmm (0.132802)
	jej (0.0989218)
	eje (0.0988338)