Non-Coding RNA Search

Ss1.1-Pig4-TMW8056E01.5

Sequence:


               
               GAGCGACCTCACCGCCATATGGTTTTTCTTCCCTTACCTGCATAAAAACCTCCCTGCTGT
TCCTGGACTTTGCCCAATCCAGAAGGAGGCTCTGAGCAGCAGAGGCTCAGCAGGGACTGG
GGAAGTCGGCCACGAGGACCTCAGAGCAGGCGGTCTGGCCCCAGGCCAGCGGTAGCTCAC
CGCCCCTCCCTCTGAGCACGGCTGCTGGCGAGCCTGCTCCTTGCAGGGTCAAAGCCAACA
CTTTGGCTCCCTGGAGATGAAGAAATGCTCCCCTGTCTGCAGAGACAGCATCCAGTACCA
CCTCGCCAAGAGAGGACTCTGCCACTGGGCCCTGGAATGACCAGACTCTCATGAGGCGCC
TGCCCTGGGTTTCCCCTCCAGCCGCTGTATCCCCAGTAACTCCTGCCTGACACACTCAGC
CCCCGTGGACACTGAGCTCCGTGGGAACTGGGGAGCCTTCCCACCCCTGAAAGCACCTGC
TGAGCCTCAGCATCTGGCTGTGGAAGGAAGCTGTGCCCCTGTGCACATAGATGCTGTGAC
CCCGTCACCGCTCCTATGGTCGCCCTCATGCTGCCTCTGGGGACAGAGCGGGAACCCCGG
CCCCTGGCTGGCTGTGGATGGGCTGGCCTTTGGAAGAATGTGTACAGAGTTGTTTTTCTC
TTGGTTATGTTTTGTTGTTTGGTTTGCTCTGCTTTTGACAGCTTTGATTTATTTTTGATG
CCCTCTTTTGGCCATGTAAACTATTTCTGGTAATTTTATGTTTTTATTTATGAATAAAGA
ATGCCATTTCTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGCGACCTCACCGCCATATGGTTTTTCTTCCCTTACCTGCATAAAAACCTCCCTGCTGT
TCCTGGACTTTGCCCAATCCAGAAGGAGGCTCTGAGCAGCAGAGGCTCAGCAGGGACTGG
GGAAGTCGGCCACGAGGACCTCAGAGCAGGCGGTCTGGCCCCAGGCCAGCGGTAGCTCAC
CGCCCCTCCCTCTGAGCACGGCTGCTGGCGAGCCTGCTCCTTGCAGGGTCAAAGCCAACA
CTTTGGCTCCCTGGAGATGAAGAAATGCTCCCCTGTCTGCAGAGACAGCATCCAGTACCA
CCTCGCCAAGAGAGGACTCTGCCACTGGGCCCTGGAATGACCAGACTCTCATGAGGCGCC
TGCCCTGGGTTTCCCCTCCAGCCGCTGTATCCCCAGTAACTCCTGCCTGACACACTCAGC
CCCCGTGGACACTGAGCTCCGTGGGAACTGGGGAGCCTTCCCACCCCTGAAAGCACCTGC
TGAGCCTCAGCATCTGGCTGTGGAAGGAAGCTGTGCCCCTGTGCACATAGATGCTGTGAC
CCCGTCACCGCTCCTATGGTCGCCCTCATGCTGCCTCTGGGGACAGAGCGGGAACCCCGG
CCCCTGGCTGGCTGTGGATGGGCTGGCCTTTGGAAGAATGTGTACAGAGTTGTTTTTCTC
TTGGTTATGTTTTGTTGTTTGGTTTGCTCTGCTTTTGACAGCTTTGATTTATTTTTGATG
CCCTCTTTTGGCCATGTAAACTATTTCTGGTAATTTTATGTTTTTATTTATGAATAAAGA
ATGCCATTTCTC

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               545-792, gnl|bosTau2|chr3 (2402155-2401914)
               

               
               545-792, gnl|Hg17|chr8 (20148208-20147966)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               545-792, gnl|bosTau2|chr3 (2402155-2401914)
               

               
               545-792, gnl|Hg17|chr8 (20148208-20147966)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

Help | Less info


               
               pla (0.133672)
               

               
               ecc (0.115035)

Expressed library(ies): 2 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)
               

               
               ecc (0.115035)

	545-792, gnl\|bosTau2\|chr3 (2402155-2401914)
	545-792, gnl\|Hg17\|chr8 (20148208-20147966)