Ss1.1-Pig4-TMW8056E12.5
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TTTGTGGCGGCGGCGGCGGCGGGATGAGTGCTCCGTCGTTGCCCCCGGCCTGGCAGCTCT
ACCTCAAGGACCACCGCATCTCCACATTTAAGAACTGGCCCTTCTTGGAGGGCTGCGCCT
GCACACCAGAGCGGATGGCCGCTGCCGGTTTCATCCACTGTCCCACTGAGAACGAGCCCG
ATTTGGCTCAATGTTTCTTCTGCTTCAAAGAGCTGGAAGGCTGGGAGCCAGACGACGACC
CCATAGAAGAACATAAAAAGCATTCATCCGGTTGTGCTTTCCTTTCTGTCAAGAAGCAGT
TTGAAGAGTTAACCCTCAGTGAATTTTTGAAACTGGACAAAGAAAGAGCCAAGAACAAAA
TTGCCAAGGAAACCAACAATAAGCAGAAAGAATTTGAAGAAACTGCAAAGAAAGTCCGCT
GTGCCATTGAGCAGCTGGCTGCCTCAGAGTGACGCCTCCCCACCGTCCTTGCCCCCAGCG
ACACGTCGTCTCCGAGGCACAGCCCTCGCGGCGTTGCCAGCTTTTCTCCAGGGCCACCTG
GCTGTGTCTGAGGAGAGGAGAACGAGAACGCCAGCCTTTTGAAATGAGAGCGCCGACTCT
GCGGGGGCTGCTTCTGCCGGGCCGCTGGTGCTGAGTACAGTGACCGATTCTTTTTCCTTT
GGCAGCTTTTGCTTTCGTGATTCCTGGACGTAGCAGGGGAGGGAGAAGTCCGTCCTCGGG
GGTAGAGCCCTTCCACGCCGTGGGCGGGACAGACAGCAGTGGGGATCCCGTTTTAAGTTT
CTCTTGCATAATAATCTCCGTTTACGGTGTGCACACCGCGTGTTCCAAGTGCTCTGTATT
GTCTCACTCTGCCGCCCGCAGGTCCCACGGCCTTCCCTTTCACCCCGTCAGGTCTGGGGT
CATAGCACCAGGGGGATTGAAAGCGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGACTGTCCCGTCTTGTGACTTTCAGGTGCACAGGGGGACCTATGGGATT
AGCCCCAGGCTCCGACTCGGGGCCTCGTCTGTGTAAGAGCTCTTTCCGGGGCTGAGTGGT |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTTGTGGCGGCGGCGGCGGCGGGATGAGTGCTCCGTCGTTGCCCCCGGCCTGGCAGCTCT
ACCTCAAGGACCACCGCATCTCCACATTTAAGAACTGGCCCTTCTTGGAGGGCTGCGCCT
GCACACCAGAGCGGATGGCCGCTGCCGGTTTCATCCACTGTCCCACTGAGAACGAGCCCG
ATTTGGCTCAATGTTTCTTCTGCTTCAAAGAGCTGGAAGGCTGGGAGCCAGACGACGACC
CCATAGAAGAACATAAAAAGCATTCATCCGGTTGTGCTTTCCTTTCTGTCAAGAAGCAGT
TTGAAGAGTTAACCCTCAGTGAATTTTTGAAACTGGACAAAGAAAGAGCCAAGAACAAAA
TTGCCAAGGAAACCAACAATAAGCAGAAAGAATTTGAAGAAACTGCAAAGAAAGTCCGCT
GTGCCATTGAGCAGCTGGCTGCCTCAGAGTGACGCCTCCCCACCGTCCTTGCCCCCAGCG
ACACGTCGTCTCCGAGGCACAGCCCTCGCGGCGTTGCCAGCTTTTCTCCAGGGCCACCTG
GCTGTGTCTGAGGAGAGGAGAACGAGAACGCCAGCCTTTTGAAATGAGAGCGCCGACTCT
GCGGGGGCTGCTTCTGCCGGGCCGCTGGTGCTGAGTACAGTGACCGATTCTTTTTCCTTT
GGCAGCTTTTGCTTTCGTGATTCCTGGACGTAGCAGGGGAGGGAGAAGTCCGTCCTCGGG
GGTAGAGCCCTTCCACGCCGTGGGCGGGACAGACAGCAGTGGGGATCCCGTTTTAAGTTT
CTCTTGCATAATAATCTCCGTTTACGGTGTGCACACCGCGTGTTCCAAGTGCTCTGTATT
GTCTCACTCTGCCGCCCGCAGGTCCCACGGCCTTCCCTTTCACCCCGTCAGGTCTGGGGT
CATAGCACCAGGGGGATTGAAAGCGCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGACTGTCCCGTCTTGTGACTTTCAGGTGCACAGGGGGACCTATGGGATT
AGCCCCAGGCTCCGACTCGGGGCCTCGTCTGTGTAAGAGCTCTTTCCGGGGCTGAGTGGT |
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11-134, gnl|bosTau2|chr19 (47796534-47796411) |
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11-134, gnl|Hg17|chr17 (73721971-73722103) |
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11-134, gnl|Mm7|chr11 (117958371-117958506) |
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245-361, gnl|bosTau2|chr19 (47794476-47794360) |
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245-361, gnl|canFam2|chr9 (5930190-5930063) |
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245-361, gnl|dasNov1|scaffold_6364 (2632-2749) |
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245-361, gnl|echTel1|scaffold_315552 (59218-59336) |
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245-361, gnl|hg17|chr17 (73724337-73724464) |
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245-361, gnl|Hg17|chr17 (73724340-73724456) |
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245-361, gnl|loxAfr1|scaffold_82472 (4663-4536) |
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245-361, gnl|mm7|chr11 (117961705-117961832) |
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245-361, gnl|Mm7|chr11 (117961708-117961824) |
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245-361, gnl|panTro1|chr19_random (54476423-54476296) |
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245-361, gnl|rheMac2|chr16 (73512117-73512244) |
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245-361, gnl|rn3|chr6 (63597638-63597531) |
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245-361, gnl|tetNig1|chr9 (3728443-3728338) |
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245-361, gnl|xenTro1|scaffold_136 (814046-814169) |
| |
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363-563, gnl|bosTau2|chr19 (47790554-47790353) |
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363-563, gnl|Hg17|chr17 (73731141-73731341) |
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363-563, gnl|Mm7|chr11 (117964270-117964462) |
| |
|
747-900, gnl|bosTau2|chr4 (23586317-23586470) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
11-134, gnl|bosTau2|chr19 (47796534-47796411) |
|
11-134, gnl|Hg17|chr17 (73721971-73722103) |
|
11-134, gnl|Mm7|chr11 (117958371-117958506) |
| |
|
245-361, gnl|bosTau2|chr19 (47794476-47794360) |
|
245-361, gnl|canFam2|chr9 (5930190-5930063) |
|
245-361, gnl|dasNov1|scaffold_6364 (2632-2749) |
|
245-361, gnl|echTel1|scaffold_315552 (59218-59336) |
|
245-361, gnl|hg17|chr17 (73724337-73724464) |
|
245-361, gnl|Hg17|chr17 (73724340-73724456) |
|
245-361, gnl|loxAfr1|scaffold_82472 (4663-4536) |
|
245-361, gnl|mm7|chr11 (117961705-117961832) |
|
245-361, gnl|Mm7|chr11 (117961708-117961824) |
|
245-361, gnl|panTro1|chr19_random (54476423-54476296) |
|
245-361, gnl|rheMac2|chr16 (73512117-73512244) |
|
245-361, gnl|rn3|chr6 (63597638-63597531) |
|
245-361, gnl|tetNig1|chr9 (3728443-3728338) |
|
245-361, gnl|xenTro1|scaffold_136 (814046-814169) |
| |
|
363-563, gnl|bosTau2|chr19 (47790554-47790353) |
|
363-563, gnl|Hg17|chr17 (73731141-73731341) |
|
363-563, gnl|Mm7|chr11 (117964270-117964462) |
| |
|
747-900, gnl|bosTau2|chr4 (23586317-23586470) |
|
fty (0.351679) |
|
cly (0.241284) |
|
med (0.232504) |
|
ece (0.229305) |
|
tes (0.207814) |
|
col (0.195008) |
|
nep (0.183925) |
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mcp (0.170648) |
|
nco (0.161734) |
|
eli (0.151814) |
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cag (0.151194) |
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hyp (0.142837) |
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cst (0.140036) |
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nmm (0.132802) |
|
ute (0.132784) |
|
eep (0.122564) |
|
ecc (0.115035) |
|
fty (0.351679) |
|
cly (0.241284) |
|
med (0.232504) |
|
ece (0.229305) |
|
tes (0.207814) |
|
col (0.195008) |
|
nep (0.183925) |
|
mcp (0.170648) |
|
nco (0.161734) |
|
eli (0.151814) |
|
cag (0.151194) |
|
hyp (0.142837) |
|
cst (0.140036) |
|
nmm (0.132802) |
|
ute (0.132784) |
|
eep (0.122564) |
|
ecc (0.115035) |
