Non-Coding RNA Search

Ss1.1-Pig4-TMW8056H11.5

Sequence:


               
               CCACAGCTATGGGAAAGCCAGATCCTTAACCCACTCTGCCATGCCAGGGATCATCACTCC
CAAAACACTGCTGATCCCATTGTGCCACAGGGGGAACTCCTTAAGAAGGTTATTTTTAAA
TTTATCCCCATGTATCTAGATAACAGGATTACATTTTGCCCCTTGATTTTTCAAGTTTCT
TCATTATCTATTGATTTCTTACTACAGAAGATAAGAATTCATCTCTTTTTTTCTTTCTCC
GCCTCATCTCACACACATACCCTTCCTGTCTCTCATTTTTCCAGTAATAGTTATATCGTA
AATTTAGTTAAATAAACCCTTTCTGCTATTTTATTATCTTCAGAGTCCAATCGTGTACTA
AACTGATATTTCCTTTTTTTTAAATTAAGTTTAAAAACCACTTCTCTGTGTGATGGGTTA
GTTAGTTTTGCTTCACTTACCATTTTACAGTTCTTTTCATTGACTTGCAAATTAAGGGTG
TTTAGGCTGGACCAGATTTTACATGAAGTTATTGAAACCTAATCTTTGGGGCCCTTCACC
AGTACCTTCCAAAACCTTTGGAGTCCCAAGAATGTGGTCATACGGTCCTTTCTATAAAAT
TTGCAAAGGCAAGATTTTTTTCCCCCCTAAAGAGCCCTTCCTCTCTTTAATTTATGTAAG
CTTCAGGCTCCAAAAAACTTGGCTCCATCCCACATGGAAAAATCACACACACACATAACT
CTGCATTCTTTGGTTCTGTGATCCTAGTATTATCTAGAATAGAGCTGCTCAGAATTACGG
TGGGCCTAATACTCTGTATTTCTGTACCACAGACTGCATGGTTTTGGTACCTGCAGAGGC
TAGAAGCCCAAAATCAAAGTGTCACCAGGGATGGCTCCTTCTGAGGATATATTCCAAGCC
TCTCTAGAAGTCCCACCTCCAGTAAGATAGGTACACATACTGAGGTACCAGGGCTTAGGA
CATGTAATACAATGGGGGGCAGAGGGGACAACACAACTCAACCTGCAACAGTTAAAAAAA
AAATCGCACTTTACCTTTTGCTTGGGATTGTTTAGTAAGTACTTGGTTCATTTATAAAAC
TCAACGATTAAAGGATACTTGAGGAAATAATTCGTTTCCCTCTCTTTTCTGGTATCTTAT
GTTGTTCATTTATATTCTATTTGCTTTTAAAACTGTAATCTAATGAAGAATATCTTTAAT
ATGATCTACTGTTACCTTTATCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACAGCTATGGGAAAGCCAGATCCTTAACCCACTCTGCCATGCCAGGGATCATCACTCC
CAAAACACTGCTGATCCCATTGTGCCACAGGGGGAACTCCTTAAGAAGGTTATTTTTAAA
TTTATCCCCATGTATCTAGATAACAGGATTACATTTTGCCCCTTGATTTTTCAAGTTTCT
TCATTATCTATTGATTTCTTACTACAGAAGATAAGAATTCATCTCTTTTTTTCTTTCTCC
GCCTCATCTCACACACATACCCTTCCTGTCTCTCATTTTTCCAGTAATAGTTATATCGTA
AATTTAGTTAAATAAACCCTTTCTGCTATTTTATTATCTTCAGAGTCCAATCGTGTACTA
AACTGATATTTCCTTTTTTTTAAATTAAGTTTAAAAACCACTTCTCTGTGTGATGGGTTA
GTTAGTTTTGCTTCACTTACCATTTTACAGTTCTTTTCATTGACTTGCAAATTAAGGGTG
TTTAGGCTGGACCAGATTTTACATGAAGTTATTGAAACCTAATCTTTGGGGCCCTTCACC
AGTACCTTCCAAAACCTTTGGAGTCCCAAGAATGTGGTCATACGGTCCTTTCTATAAAAT
TTGCAAAGGCAAGATTTTTTTCCCCCCTAAAGAGCCCTTCCTCTCTTTAATTTATGTAAG
CTTCAGGCTCCAAAAAACTTGGCTCCATCCCACATGGAAAAATCACACACACACATAACT
CTGCATTCTTTGGTTCTGTGATCCTAGTATTATCTAGAATAGAGCTGCTCAGAATTACGG
TGGGCCTAATACTCTGTATTTCTGTACCACAGACTGCATGGTTTTGGTACCTGCAGAGGC
TAGAAGCCCAAAATCAAAGTGTCACCAGGGATGGCTCCTTCTGAGGATATATTCCAAGCC
TCTCTAGAAGTCCCACCTCCAGTAAGATAGGTACACATACTGAGGTACCAGGGCTTAGGA
CATGTAATACAATGGGGGGCAGAGGGGACAACACAACTCAACCTGCAACAGTTAAAAAAA
AAATCGCACTTTACCTTTTGCTTGGGATTGTTTAGTAAGTACTTGGTTCATTTATAAAAC
TCAACGATTAAAGGATACTTGAGGAAATAATTCGTTTCCCTCTCTTTTCTGGTATCTTAT
GTTGTTCATTTATATTCTATTTGCTTTTAAAACTGTAATCTAATGAAGAATATCTTTAAT
ATGATCTACTGTTACCTTTATCTT

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

Help | Less info


               
               101-802, gnl|bosTau2|chr4 (34603239-34602541)
               


               
               884-1202, gnl|bosTau2|chr4 (34601952-34601646)

Aligned organism(s): 2 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               101-802, gnl|bosTau2|chr4 (34603239-34602541)
               


               
               884-1202, gnl|bosTau2|chr4 (34601952-34601646)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               csk (0.140746)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               csk (0.140746)

	101-802, gnl\|bosTau2\|chr4 (34603239-34602541)

	884-1202, gnl\|bosTau2\|chr4 (34601952-34601646)