Non-Coding RNA Search

Ss1.1-Pig4-TMW8056K23.3

Sequence:


               
               AGGACAGGAGAGAACAGGAAATCAACTACGTGTGTAACTGTGTTGCCTTTATTACACTGC
TAGTACTATCTCGTCACCTCAGATTGGGGTTGTGCACTTTAGATCTGAACTGTACAGTGT
TGCCAATCAACCTGTGTTGCTGTAAAAGCTTGTACAATATATTATTGATGTGTCTTTTCC
TGTGTGGTAAGTGTACTGATATTCTGAGAACCACATTCCCTTCTGTGCCTGGACTCTCTC
TCTCACCCTCTCTCTGCTAAACTGTGTGCCCTCCACCTCAGCTCTGACAGAATGCCCTCG
GCTCTGCTCGCAGCTCAGAATCCTCCTATGAGAACTGTGTGGTTTCATAAGATGCAGAGA
GAACGCTACTTGAGTGTCTCTAAGAATAGAGGAAACCAACATGGAGCATTGCAAACGGCC
AACGTTGCAGGCACTGTCCCTGCTAAGATTTGGAGGAGGTGCTACTCCTCAGAAAATGGA
CCAAGAAAGCACAGGTGTAAATACAGCAGCAGGACAAGGAACCCTGGAACCTAACAGTGG
GTATCATCTTGCACGTGCCCTCCTGTTGTCAAATGCTAAGTGCCAACACTGTGTATTGAT
TAGTTCCCCGTGCCAAAATACTGTTCCCAGTTGGTGTTTCTGGAAGACATCCACATCTCC
CCAGCATCACTCCATTACTAAAGACAGAAAACAATAAAAAAAAATATATATATATATATA
TAAACATGTGGCAACCTGTTCTTCTTACCAAATATAACTTGTGTATGATCAGAGTATTTT
ACTTGTGTTGTCTCTCTAAACCCAAATAAATGTGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGACAGGAGAGAACAGGAAATCAACTACGTGTGTAACTGTGTTGCCTTTATTACACTGC
TAGTACTATCTCGTCACCTCAGATTGGGGTTGTGCACTTTAGATCTGAACTGTACAGTGT
TGCCAATCAACCTGTGTTGCTGTAAAAGCTTGTACAATATATTATTGATGTGTCTTTTCC
TGTGTGGTAAGTGTACTGATATTCTGAGAACCACATTCCCTTCTGTGCCTGGACTCTCTC
TCTCACCCTCTCTCTGCTAAACTGTGTGCCCTCCACCTCAGCTCTGACAGAATGCCCTCG
GCTCTGCTCGCAGCTCAGAATCCTCCTATGAGAACTGTGTGGTTTCATAAGATGCAGAGA
GAACGCTACTTGAGTGTCTCTAAGAATAGAGGAAACCAACATGGAGCATTGCAAACGGCC
AACGTTGCAGGCACTGTCCCTGCTAAGATTTGGAGGAGGTGCTACTCCTCAGAAAATGGA
CCAAGAAAGCACAGGTGTAAATACAGCAGCAGGACAAGGAACCCTGGAACCTAACAGTGG
GTATCATCTTGCACGTGCCCTCCTGTTGTCAAATGCTAAGTGCCAACACTGTGTATTGAT
TAGTTCCCCGTGCCAAAATACTGTTCCCAGTTGGTGTTTCTGGAAGACATCCACATCTCC
CCAGCATCACTCCATTACTAAAGACAGAAAACAATAAAAAAAAATATATATATATATATA
TAAACATGTGGCAACCTGTTCTTCTTACCAAATATAACTTGTGTATGATCAGAGTATTTT
ACTTGTGTTGTCTCTCTAAACCCAAATAAATGTGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-816, gnl|bosTau2|chr13 (14971516-14972304)
               

               
               6-816, gnl|Hg17|chr10 (26632688-26633481)
               

               
               6-816, gnl|Mm7|chr2 (22677986-22678814)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-816, gnl|bosTau2|chr13 (14971516-14972304)
               

               
               6-816, gnl|Hg17|chr10 (26632688-26633481)
               

               
               6-816, gnl|Mm7|chr2 (22677986-22678814)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               fhi (0.339155)
               

               
               ret (0.257467)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fhi (0.339155)
               

               
               ret (0.257467)

	6-816, gnl\|bosTau2\|chr13 (14971516-14972304)
	6-816, gnl\|Hg17\|chr10 (26632688-26633481)
	6-816, gnl\|Mm7\|chr2 (22677986-22678814)