Non-Coding RNA Search

Ss1.1-Pig4-TMW8056M13.3

Sequence:


               
               CAGCAATCCGGGCTCACGGCAGCCTCTCCAGTGACTATATATGTTCCTGGAGATGCACTT
TGTATTGAGCTAATCAGCAAAGCAGCGGCAGGTGCCGCATGCCGAGTAGGGCGACCAGTG
CGTGGTCACTGAGGAAGTACTCTTTTTCTCTTGAGGAAGTATTTTTTTTTTCTCCTAAAA
GTGCCTTTTAATTGACCACTGTCACAGCCACTTTCCTGCTCAAGCATCCAAGACACTCCC
CTCACCCACAGATTCCAAGTCACATACGGTGGTTCCCGGTGCTTGTGTTTTGTGAATAAA
AGGAAAAAGTCAAACATCACTGATGTCTCATTTCACTGAGATATTTTTGTTTAAAGAGAG
TTAGAAGCAGAAAAGGATCTTCCTATTTTGCACTTCTAGCATTTATATAGTTTTATGATT
ATAAAATAATATATATACCTTTATATGCATAAAGCAAACCTCTGGAAGGAAATGTACCCA
CATGTTATCAGAGGTTATTTTGGAAGGTAGAGTACATAGAATTTTGCTGGGTTTTTTACA
GTTTTATATTGCTGTCTTTTAAAAATGTGTGTGTATATACATGTATGTGTACTACTTTTG
CAGTAGTAAAACTGATTTACGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGCAATCCGGGCTCACGGCAGCCTCTCCAGTGACTATATATGTTCCTGGAGATGCACTT
TGTATTGAGCTAATCAGCAAAGCAGCGGCAGGTGCCGCATGCCGAGTAGGGCGACCAGTG
CGTGGTCACTGAGGAAGTACTCTTTTTCTCTTGAGGAAGTATTTTTTTTTTCTCCTAAAA
GTGCCTTTTAATTGACCACTGTCACAGCCACTTTCCTGCTCAAGCATCCAAGACACTCCC
CTCACCCACAGATTCCAAGTCACATACGGTGGTTCCCGGTGCTTGTGTTTTGTGAATAAA
AGGAAAAAGTCAAACATCACTGATGTCTCATTTCACTGAGATATTTTTGTTTAAAGAGAG
TTAGAAGCAGAAAAGGATCTTCCTATTTTGCACTTCTAGCATTTATATAGTTTTATGATT
ATAAAATAATATATATACCTTTATATGCATAAAGCAAACCTCTGGAAGGAAATGTACCCA
CATGTTATCAGAGGTTATTTTGGAAGGTAGAGTACATAGAATTTTGCTGGGTTTTTTACA
GTTTTATATTGCTGTCTTTTAAAAATGTGTGTGTATATACATGTATGTGTACTACTTTTG
CAGTAGTAAAACTGATTTACGAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-619, gnl|bosTau2|chr21 (31112665-31113260)
               

               
               1-619, gnl|Hg17|chr2 (227686417-227687040)
               

               
               1-619, gnl|Mm7|chr1 (82652305-82652892)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-619, gnl|bosTau2|chr21 (31112665-31113260)
               

               
               1-619, gnl|Hg17|chr2 (227686417-227687040)
               

               
               1-619, gnl|Mm7|chr1 (82652305-82652892)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               aor (0.195274)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               aor (0.195274)

	1-619, gnl\|bosTau2\|chr21 (31112665-31113260)
	1-619, gnl\|Hg17\|chr2 (227686417-227687040)
	1-619, gnl\|Mm7\|chr1 (82652305-82652892)