Non-Coding RNA Search

Ss1.1-Pig4-TMW8056O02.3

Sequence:


               
               TTTTTTTTTTTTTTTTTGGTTAGGACTTTTTCATTGATCTGAATTGCTTAAATTGCATAT
ATTGTAAAATAGGATCAGATGTATATTTTAAAATAATTTCAACTGACTTTCCTCTATTGA
AATGCTTTGTCTACTCAGTTATAAAATATTCAGATACAAGTTTTATCTCAGGTGAATACT
CTTGTATCCTTGCTTTGGTGACATGCTTATAAAGGGTCATCATACTATTCTTTTGGTTTT
TTTAGTGTGAAAAATCCTCATTTAGTCTGACGTTCCAATCCTTGTTCTAGCAGACTATGG
CAGTATAAATCCTTCCTGGTGAGCCCTTTGATATGTAGGCTTACCTTGAAAGTGAAGTCA
GTTTGGTTCTCTTTTTCTCCAAACTCTTTAAGAAAGTGGAAAATTTTTTGTTAAATTACC
TTTATTAAATTACCCTGCATAGCTGGAATGCCAGAATTAAACTAATTATGTCTTATACCC
TTTAATCCAAATTTAACTTAAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTGGTTAGGACTTTTTCATTGATCTGAATTGCTTAAATTGCATAT
ATTGTAAAATAGGATCAGATGTATATTTTAAAATAATTTCAACTGACTTTCCTCTATTGA
AATGCTTTGTCTACTCAGTTATAAAATATTCAGATACAAGTTTTATCTCAGGTGAATACT
CTTGTATCCTTGCTTTGGTGACATGCTTATAAAGGGTCATCATACTATTCTTTTGGTTTT
TTTAGTGTGAAAAATCCTCATTTAGTCTGACGTTCCAATCCTTGTTCTAGCAGACTATGG
CAGTATAAATCCTTCCTGGTGAGCCCTTTGATATGTAGGCTTACCTTGAAAGTGAAGTCA
GTTTGGTTCTCTTTTTCTCCAAACTCTTTAAGAAAGTGGAAAATTTTTTGTTAAATTACC
TTTATTAAATTACCCTGCATAGCTGGAATGCCAGAATTAAACTAATTATGTCTTATACCC
TTTAATCCAAATTTAACTTAAATC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-504, gnl|bosTau2|chr20 (5297231-5297748)
               

               
               11-504, gnl|Hg17|chr5 (72243882-72244367)
               

               
               11-504, gnl|Mm7|chr13 (95910901-95910388)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-504, gnl|bosTau2|chr20 (5297231-5297748)
               

               
               11-504, gnl|Hg17|chr5 (72243882-72244367)
               

               
               11-504, gnl|Mm7|chr13 (95910901-95910388)

Expressed library(ies): 2 entry(ies)

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Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               liv (0.146284)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               liv (0.146284)

	11-504, gnl\|bosTau2\|chr20 (5297231-5297748)
	11-504, gnl\|Hg17\|chr5 (72243882-72244367)
	11-504, gnl\|Mm7\|chr13 (95910901-95910388)