Ss1.1-Pig4-TMW8056O03.3
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GCAATGAGACAACAGCGGCGAGGCTCATGTTTGAAATGGCCGGGGTTTCCTTCAGGAAAT
TCACACCAAAGTGCAGCCAGATTGTCATTGACTTTGATTCAATTAACAGCAGAGCGAGTG
AGACACTCCAGTGAGTGACACGTCATTGCATCTCCAGATCGGGATTATCCTCTTCTAAGA
AGCTCTAATGCCTTTCATCTGGAAGTTATACAGAACTTTTTAATAGCCAGGGCAGCACAC
GTCCACATCTGAAGAACATAAGACCTCCAATCTTCCCGACTCTCTCCCGTCACCTAGAAT
CAGCATCTGTTGAAATTACTGATCGAGGGTTTCAAAGAAAGGAGCTGTGGATGACCTGTC
TCGAAGGTTTGGAGCGGGCGCCTTCCCTCCTGTCCCCTGGTTTGCTGGGATACTTGTGGC
TCTGCAGAAGGGCGTCAGCTGTGTGTCGTGCACTGCGTTTCACAGCTGCTCTTCAACACT
CCCTGTGCTGGAAGGACTGATGAATCATTGCAGTTGTGTTCCTAGCTGGATGAGCAGACA
CCCCAGTCCAAACATCTGGCTCAAGTGAAGCATAACGTGTGATGCCTTTGGGAGAAAAAA
GGGATCCATAAGGCATTAGCATTTAAGCATTTGCTTTAGGGAGTTGAGGGAACCAACACC
CAACCACCTGAAACACCTGGATGGGGGGGGCCACATCTGTCCCGACAGACAATGAGCATA
ACTGAGCCTGCGATTCTTTCTCCACTTCTGTTGACCTGCTACCCACAGGGTAGTGGCACG
GTATCCCTCTGGGTCTGGAGACCTCCATTGTTTTATTTTTTGGCTGCCCCTGTGGCATGC
GGAAGTTTTTGGGCCAGAGATTGAATCCATGCCACAGCAGTGACCTGAGCCCCCAGCAGT
GACAACACCGGACTGCTGACTCACTGAGCCACCAGGGAACTCCCAGACCCCTGTTCTTCT
CATCTTTGGTTTGTTGGTGGCACAGACCTGTTACATTAGTTTTTCTGGATAATGAGTAGT
TCCCAGAGGAGGCAGCCTGTCTCCTGGTGTCACCCCAGGACCATGTCCTTCCATGGAGCG
GGTGGTATGGGTAGGGGCTGAGCACGCACCTGCTGTTCCACTGACCAGTAGTGCAGTAGT
GTTCATTTTCAAGGCTGCTCTAGCCTATCCTAAAGTGAAACGGGAGAGAGCTCAACCCAT
CTCCAGGCGTTTCTTCCAGATCTGTGTGTGATGGGAGCTTGCTTGTCCTCCTGGCCCCCT
GCCGTCCTCAACACAAATCTCACCCTCCTAATCACTGCAATTTGGGGAATGGGTAGCCGG
GCACCTTGTCTTTAATCTCATTTAGTTTTTATTAGACGTGCTCAGTACTTTTGTTGAGAA
AATGGTTTCTTTATCCTAAAGATTATGACTGTTTAAAGTGCTCTTACATTTTTATGAGTT
TTTATTTTGTCTCTGAGGTTTTGTACTCCATGTTCTGGGGTATTCGTAATTTGGCTCCTG
ACCACAGTTATTAAAATCTTATTAAAATCCTAAAAA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAATGAGACAACAGCGGCGAGGCTCATGTTTGAAATGGCCGGGGTTTCCTTCAGGAAAT
TCACACCAAAGTGCAGCCAGATTGTCATTGACTTTGATTCAATTAACAGCAGAGCGAGTG
AGACACTCCAGTGAGTGACACGTCATTGCATCTCCAGATCGGGATTATCCTCTTCTAAGA
AGCTCTAATGCCTTTCATCTGGAAGTTATACAGAACTTTTTAATAGCCAGGGCAGCACAC
GTCCACATCTGAAGAACATAAGACCTCCAATCTTCCCGACTCTCTCCCGTCACCTAGAAT
CAGCATCTGTTGAAATTACTGATCGAGGGTTTCAAAGAAAGGAGCTGTGGATGACCTGTC
TCGAAGGTTTGGAGCGGGCGCCTTCCCTCCTGTCCCCTGGTTTGCTGGGATACTTGTGGC
TCTGCAGAAGGGCGTCAGCTGTGTGTCGTGCACTGCGTTTCACAGCTGCTCTTCAACACT
CCCTGTGCTGGAAGGACTGATGAATCATTGCAGTTGTGTTCCTAGCTGGATGAGCAGACA
CCCCAGTCCAAACATCTGGCTCAAGTGAAGCATAACGTGTGATGCCTTTGGGAGAAAAAA
GGGATCCATAAGGCATTAGCATTTAAGCATTTGCTTTAGGGAGTTGAGGGAACCAACACC
CAACCACCTGAAACACCTGGATGGGGGGGGCCACATCTGTCCCGACAGACAATGAGCATA
ACTGAGCCTGCGATTCTTTCTCCACTTCTGTTGACCTGCTACCCACAGGGTAGTGGCACG
GTATCCCTCTGGGTCTGGAGACCTCCATTGTTTTATTTTTTGGCTGCCCCTGTGGCATGC
GGAAGTTTTTGGGCCAGAGATTGAATCCATGCCACAGCAGTGACCTGAGCCCCCAGCAGT
GACAACACCGGACTGCTGACTCACTGAGCCACCAGGGAACTCCCAGACCCCTGTTCTTCT
CATCTTTGGTTTGTTGGTGGCACAGACCTGTTACATTAGTTTTTCTGGATAATGAGTAGT
TCCCAGAGGAGGCAGCCTGTCTCCTGGTGTCACCCCAGGACCATGTCCTTCCATGGAGCG
GGTGGTATGGGTAGGGGCTGAGCACGCACCTGCTGTTCCACTGACCAGTAGTGCAGTAGT
GTTCATTTTCAAGGCTGCTCTAGCCTATCCTAAAGTGAAACGGGAGAGAGCTCAACCCAT
CTCCAGGCGTTTCTTCCAGATCTGTGTGTGATGGGAGCTTGCTTGTCCTCCTGGCCCCCT
GCCGTCCTCAACACAAATCTCACCCTCCTAATCACTGCAATTTGGGGAATGGGTAGCCGG
GCACCTTGTCTTTAATCTCATTTAGTTTTTATTAGACGTGCTCAGTACTTTTGTTGAGAA
AATGGTTTCTTTATCCTAAAGATTATGACTGTTTAAAGTGCTCTTACATTTTTATGAGTT
TTTATTTTGTCTCTGAGGTTTTGTACTCCATGTTCTGGGGTATTCGTAATTTGGCTCCTG
ACCACAGTTATTAAAATCTTATTAAAATCCTAAAAA
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50-560, gnl|bosTau2|chr27 (7210817-7210316) |
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50-560, gnl|Hg17|chr4 (184187785-184187239) |
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50-560, gnl|Mm7|chr8 (46920225-46920743) |
| |
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584-812, gnl|bosTau2|chr27 (7210317-7210092) |
|
584-812, gnl|canFam2|chr16 (50337767-50337314) |
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584-812, gnl|echTel1|scaffold_312230 (55474-55863) |
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584-812, gnl|galGal2|chr4 (40634417-40633989) |
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584-812, gnl|hg17|chr4 (184186940-184187426) |
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584-812, gnl|Hg17|chr4 (184187240-184187015) |
|
584-812, gnl|loxAfr1|scaffold_23882 (53574-54009) |
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584-812, gnl|mm7|chr8 (46921050-46920610) |
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584-812, gnl|Mm7|chr8 (46920742-46920975) |
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584-812, gnl|monDom2|scaffold_9 (64631251-64631741) |
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584-812, gnl|oryCun1|scaffold_201754 (11208-10891) |
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584-812, gnl|panTro1|chr3 (202410742-202411235) |
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584-812, gnl|rheMac2|chr5 (175000717-175001203) |
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584-812, gnl|rn3|chr16 (47241601-47242060) |
| |
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956-1530, gnl|bosTau2|chr27 (7210087-7209528) |
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956-1530, gnl|Hg17|chr4 (184187010-184186407) |
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956-1530, gnl|Mm7|chr8 (46920980-46921542) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
50-560, gnl|bosTau2|chr27 (7210817-7210316) |
|
50-560, gnl|Hg17|chr4 (184187785-184187239) |
|
50-560, gnl|Mm7|chr8 (46920225-46920743) |
| |
|
584-812, gnl|bosTau2|chr27 (7210317-7210092) |
|
584-812, gnl|canFam2|chr16 (50337767-50337314) |
|
584-812, gnl|echTel1|scaffold_312230 (55474-55863) |
|
584-812, gnl|galGal2|chr4 (40634417-40633989) |
|
584-812, gnl|hg17|chr4 (184186940-184187426) |
|
584-812, gnl|Hg17|chr4 (184187240-184187015) |
|
584-812, gnl|loxAfr1|scaffold_23882 (53574-54009) |
|
584-812, gnl|mm7|chr8 (46921050-46920610) |
|
584-812, gnl|Mm7|chr8 (46920742-46920975) |
|
584-812, gnl|monDom2|scaffold_9 (64631251-64631741) |
|
584-812, gnl|oryCun1|scaffold_201754 (11208-10891) |
|
584-812, gnl|panTro1|chr3 (202410742-202411235) |
|
584-812, gnl|rheMac2|chr5 (175000717-175001203) |
|
584-812, gnl|rn3|chr16 (47241601-47242060) |
| |
|
956-1530, gnl|bosTau2|chr27 (7210087-7209528) |
|
956-1530, gnl|Hg17|chr4 (184187010-184186407) |
|
956-1530, gnl|Mm7|chr8 (46920980-46921542) |
|
pgl (0.35545) |
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pty (0.285429) |
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spc (0.226732) |
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eje (0.197668) |
|
mcp (0.170648) |
|
cki (0.165235) |
|
ski (0.146735) |
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spl (0.143184) |
|
lyg (0.133103) |
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cly (0.120642) |
|
eru (0.120048) |
|
cty (0.10408) |
|
pgl (0.35545) |
|
pty (0.285429) |
|
spc (0.226732) |
|
eje (0.197668) |
|
mcp (0.170648) |
|
cki (0.165235) |
|
ski (0.146735) |
|
spl (0.143184) |
|
lyg (0.133103) |
|
cly (0.120642) |
|
eru (0.120048) |
|
cty (0.10408) |
