Ss1.1-Pig4-TMW8056O07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAATTCGGCACGAGAGGACATGATCCTGCAGTTCATCAGCCGGGAGAGCAGCCTCATC CTCGCCGTCACCCCCGCCAACATGGACCTGGCCAACTCGGACGCCCTCAAGCTGGCCAAG GAGGTCGACCCTCAAGGCCTGCGGACCATTGGCGTCATCACCAAGCTTGACCTGATGGAC GAAGGCACTGATGCCAGGGATGTCCTGGAGAACAAGCTGCGTCCCCTTGAGAAGAGGCTA CATTGGTGTGGTGAACCGCAGCCAGAAGGACATCGAGGGCAAGAAGGACATTCGTGCAGC TCTGGCGGCTGAGAGGAAATTCTTCCTCTCCCACCCCGCCTACCGGCACATGGCTGACCG CATGGGCACCCCACACCTGCAGAAGACTCTGAATCAGGTACAGAGAGGGTTTTGTGCACT TGCTCAGGCTATGCACTGTACCACAGCTGCCATCCACAATGGCTCTGTTCTTGGTCTAAT GCAGAACAAATTTTAGCAAAATTGATTCAGTCAACATTTGTTTGATTTAAGGCCTCGTGA AGAGTGGTTGTTCAATGAATTGGTGCCAATAATGTTATTGCCATCGATGTTATTAGTACC ATTATTTTAATTTCCACTGTAATTATTTAGTCATCATGTGTATAGCTCCTGACTTTGATG ACCAGGGTTACGAGTGCCTGCCTCACTTGGACCAAGGCAGGGTGGCTGGTAGCACTAAAC AGTGGGTAAGCGGGAGGACTTTGGAGCTTGACCTTCTTGGGTCCAAAGCCCAGCCCAGCC CAGCCTCGCTGAGCCTCCCTCCCCTGTCCATCAATCGGGAGTTATCACCGTCCCTGCCCC AGGGTTGTCATCTCCTATGTGCTCATCAACTAGGCTACATGAAATATAGCACGTACCAAA TGCAGGCAACTCTGCTATTTCATTGCCTTCTTATTATTCTTTTTTCATAATTAATGTATT CACAGGGTTCATGATCATTTAAAGTATACAGTGAAGGAAAGTCCTGTGTGGCGCAATGGG TTAAGGATCTGGCATTGCCGCAGCTGTGGCACAGGTGGAGACGGCAGT------------ ------------------------AGAAGGTGCGCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAATTCGGCACGAGAGGACATGATCCTGCAGTTCATCAGCCGGGAGAGCAGCCTCATC CTCGCCGTCACCCCCGCCAACATGGACCTGGCCAACTCGGACGCCCTCAAGCTGGCCAAG GAGGTCGACCCTCAAGGCCTGCGGACCATTGGCGTCATCACCAAGCTTGACCTGATGGAC GAAGGCACTGATGCCAGGGATGTCCTGGAGAACAAGCTGCGTCCCCTTGAGAAGAGGCTA CATTGGTGTGGTGAACCGCAGCCAGAAGGACATCGAGGGCAAGAAGGACATTCGTGCAGC TCTGGCGGCTGAGAGGAAATTCTTCCTCTCCCACCCCGCCTACCGGCACATGGCTGACCG CATGGGCACCCCACACCTGCAGAAGACTCTGAATCAGGTACAGAGAGGGTTTTGTGCACT TGCTCAGGCTATGCACTGTACCACAGCTGCCATCCACAATGGCTCTGTTCTTGGTCTAAT GCAGAACAAATTTTAGCAAAATTGATTCAGTCAACATTTGTTTGATTTAAGGCCTCGTGA AGAGTGGTTGTTCAATGAATTGGTGCCAATAATGTTATTGCCATCGATGTTATTAGTACC ATTATTTTAATTTCCACTGTAATTATTTAGTCATCATGTGTATAGCTCCTGACTTTGATG ACCAGGGTTACGAGTGCCTGCCTCACTTGGACCAAGGCAGGGTGGCTGGTAGCACTAAAC AGTGGGTAAGCGGGAGGACTTTGGAGCTTGACCTTCTTGGGTCCAAAGCCCAGCCCAGCC CAGCCTCGCTGAGCCTCCCTCCCCTGTCCATCAATCGGGAGTTATCACCGTCCCTGCCCC AGGGTTGTCATCTCCTATGTGCTCATCAACTAGGCTACATGAAATATAGCACGTACCAAA TGCAGGCAACTCTGCTATTTCATTGCCTTCTTATTATTCTTTTTTCATAATTAATGTATT CACAGGGTTCATGATCATTTAAAGTATACAGTGAAGGAAAGTCCTGTGTGGCGCAATGGG TTAAGGATCTGGCATTGCCGCAGCTGTGGCACAGGTGGAGACGGCAGT------------ ------------------------AGAAGGTGCGCC |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 18-137, gnl|bosTau2|chr11 (78120751-78120870) | |
| 18-137, gnl|canFam2|chr9 (58627697-58627503) | |
| 18-137, gnl|danRer3|chr23 (37777611-37777820) | |
| 18-137, gnl|dasNov1|scaffold_27923 (2562-2781) | |
| 18-137, gnl|echTel1|scaffold_297331 (34389-34608) | |
| 18-137, gnl|fr1|chrUn (160308320-160308534) | |
| 18-137, gnl|galGal2|chr17 (5689995-5690214) | |
| 18-137, gnl|hg17|chr9 (128060876-128061095) | |
| 18-137, gnl|Hg17|chr9 (128060967-128061086) | |
| 18-137, gnl|loxAfr1|scaffold_107900 (462-681) | |
| 18-137, gnl|mm7|chr2 (32347443-32347224) | |
| 18-137, gnl|Mm7|chr2 (32347350-32347231) | |
| 18-137, gnl|monDom2|scaffold_51 (2734625-2734844) | |
| 18-137, gnl|oryCun1|scaffold_199290 (4429-4210) | |
| 18-137, gnl|panTro1|chr11 (112894932-112895151) | |
| 18-137, gnl|rheMac2|chr15 (10661591-10661372) | |
| 18-137, gnl|rn3|chr3 (11362685-11362466) | |
| 18-137, gnl|tetNig1|chr4 (2682230-2682443) | |
| 18-137, gnl|xenTro1|scaffold_82 (380277-380060) | |
| 235-400, gnl|bosTau2|chr11 (78121363-78121528) | |
| 235-400, gnl|Hg17|chr9 (128062012-128062177) | |
| 235-400, gnl|Mm7|chr2 (32345207-32345042) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 18-137, gnl|bosTau2|chr11 (78120751-78120870) | |
| 18-137, gnl|canFam2|chr9 (58627697-58627503) | |
| 18-137, gnl|danRer3|chr23 (37777611-37777820) | |
| 18-137, gnl|dasNov1|scaffold_27923 (2562-2781) | |
| 18-137, gnl|echTel1|scaffold_297331 (34389-34608) | |
| 18-137, gnl|fr1|chrUn (160308320-160308534) | |
| 18-137, gnl|galGal2|chr17 (5689995-5690214) | |
| 18-137, gnl|hg17|chr9 (128060876-128061095) | |
| 18-137, gnl|Hg17|chr9 (128060967-128061086) | |
| 18-137, gnl|loxAfr1|scaffold_107900 (462-681) | |
| 18-137, gnl|mm7|chr2 (32347443-32347224) | |
| 18-137, gnl|Mm7|chr2 (32347350-32347231) | |
| 18-137, gnl|monDom2|scaffold_51 (2734625-2734844) | |
| 18-137, gnl|oryCun1|scaffold_199290 (4429-4210) | |
| 18-137, gnl|panTro1|chr11 (112894932-112895151) | |
| 18-137, gnl|rheMac2|chr15 (10661591-10661372) | |
| 18-137, gnl|rn3|chr3 (11362685-11362466) | |
| 18-137, gnl|tetNig1|chr4 (2682230-2682443) | |
| 18-137, gnl|xenTro1|scaffold_82 (380277-380060) | |
| 235-400, gnl|bosTau2|chr11 (78121363-78121528) | |
| 235-400, gnl|Hg17|chr9 (128062012-128062177) | |
| 235-400, gnl|Mm7|chr2 (32345207-32345042) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| med (0.116252) |