Non-Coding RNA Search

Ss1.1-Pig4-TMW8057B16.5

Sequence:


               
               AAGAGACAAATGCACGAGCACCAGAATGTCTGGCATTGAAAGCAGATCTTACGTCTAAGA
AAAGGGTATATAATGAAGCTGAGGTTTTATATAACCGTTCCTTAAACGAATATAGAGCAT
TAAAGAAAGATGATGAACAGCTTTGCAAAAGAATTGAAGAACTGAGAAAAAGTGCTGATC
AGTCTATGGAACCTGAGCGGTTGGAAAGGCAAAAAAAAATATCTTGGTTAAAAGAGAGAG
TAAAGGCCTTACAGGATCAAGAAATTTCAGTCAATCAAGAGATTGAACAGTTTCAGCAAG
CTGTAGAAAAGGACAAAGAAGAACATACCAGAATTAAGAGAGAAGAATTAGATGTGAAGC
AAATACTGAATTATAATCAGAAGCAACTGAAAGAATTGAAAGATAGTAAAACTGATCGAC
TCAAAAGATTTGGCCCTAATGTTCCAGCTCTTCTTGAAGCAATAGATAATGCTTACAGAC
GAGGGCAATTTACCTATAAACCGGTAGGCCTTAGACGGCCTTCGTCTTCGGGACCCTGAG
CTTGCTTTGGCTATTGAATCCTGCTTAAAAGGACTTCTGCAGGCCTATTGTTGCCATAAT
CATGCTGATGAAAGAGTGCTTCAGGCACTGATGAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGAGACAAATGCACGAGCACCAGAATGTCTGGCATTGAAAGCAGATCTTACGTCTAAGA
AAAGGGTATATAATGAAGCTGAGGTTTTATATAACCGTTCCTTAAACGAATATAGAGCAT
TAAAGAAAGATGATGAACAGCTTTGCAAAAGAATTGAAGAACTGAGAAAAAGTGCTGATC
AGTCTATGGAACCTGAGCGGTTGGAAAGGCAAAAAAAAATATCTTGGTTAAAAGAGAGAG
TAAAGGCCTTACAGGATCAAGAAATTTCAGTCAATCAAGAGATTGAACAGTTTCAGCAAG
CTGTAGAAAAGGACAAAGAAGAACATACCAGAATTAAGAGAGAAGAATTAGATGTGAAGC
AAATACTGAATTATAATCAGAAGCAACTGAAAGAATTGAAAGATAGTAAAACTGATCGAC
TCAAAAGATTTGGCCCTAATGTTCCAGCTCTTCTTGAAGCAATAGATAATGCTTACAGAC
GAGGGCAATTTACCTATAAACCGGTAGGCCTTAGACGGCCTTCGTCTTCGGGACCCTGAG
CTTGCTTTGGCTATTGAATCCTGCTTAAAAGGACTTCTGCAGGCCTATTGTTGCCATAAT
CATGCTGATGAAAGAGTGCTTCAGGCACTGATGAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|55602566|ref|XP_525879.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55602566|ref|XP_525879.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               212-636, gnl|bosTau2|chr2 (13709634-13710042)
               

               
               212-636, gnl|Hg17|chr2 (17819761-17817836)
               

               
               212-636, gnl|Mm7|chr12 (11353851-11355570)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               212-636, gnl|bosTau2|chr2 (13709634-13710042)
               

               
               212-636, gnl|Hg17|chr2 (17819761-17817836)
               

               
               212-636, gnl|Mm7|chr12 (11353851-11355570)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               cty (0.10408)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cty (0.10408)

	212-636, gnl\|bosTau2\|chr2 (13709634-13710042)
	212-636, gnl\|Hg17\|chr2 (17819761-17817836)
	212-636, gnl\|Mm7\|chr12 (11353851-11355570)