Non-Coding RNA Search

Ss1.1-Pig4-TMW8057F22.5

Sequence:


               
               AGAAGGAAGCTCCCTGGTGCTTCACCTTGGATGAGAACTTTAAGTCCGACCTGTGTGACA
TCCCAGCATGTGATTCAAAGGATTCCAAAGAGAAGAATAAAATGGAAATCCTGTACATAC
TGGTGCCCAGTGTTGCCATCCCCCTGGCCATTGCCTTACTCTTCTTCTTCATCTGTGTCT
GTCGCAATAACCAGAAGTCGTCCTCACCGCCTGTCCAGAGGCAACCGAAACACGTCAGAG
GCCAAAATGTAGAGATGTCCATGTTGAATGCCTATAAACCCAAGAGCAAGGCTAAAGAGC
TGCCTCTTTCTGCTGTACGTTTTATGGAAGAACTGGGTGAATGTGCCTTTGGAAAGATCT
ATAAGGGCCATCTCTATCTCCCAGGCATGGACCATGCTCAGTTAGTTGCCATAAAGACCT
TGAAAGACTATAACAACCCCCAGCAGTGGACAGAATTTCAACAGGAAGCCTCCCTGATGG
CCGAACTTCATCACCCCAATATTGTCTGCCTTCTGGGGGCTGTCACTCAGGAACAACCTG
TGTGTATGCTTTTTGAGTATATGAATCAGGGGGATCTCCACGAGTTCCTCATCATGCGGT
CCCCACACTCAGATGTTGGCTGTAGCAGTGATGAAGATGGGACAGTAAAATCCAGCCTGG
ATCACGGAGATTTTCTACACATTGCGATTCAGATTGCAGCTGGCATGGAGTACCTGTCCA
GTCACTTCTTTGTCCATAAGGACCTCGCGGCTCGCAATATTCTCATCGGAGAGCAGCTTC
ACGTAAAGATTTCAGACCTTGGGCTTTCCAGAGAAATATACTCTGCTGATTACTACAGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGAAGGAAGCTCCCTGGTGCTTCACCTTGGATGAGAACTTTAAGTCCGACCTGTGTGACA
TCCCAGCATGTGATTCAAAGGATTCCAAAGAGAAGAATAAAATGGAAATCCTGTACATAC
TGGTGCCCAGTGTTGCCATCCCCCTGGCCATTGCCTTACTCTTCTTCTTCATCTGTGTCT
GTCGCAATAACCAGAAGTCGTCCTCACCGCCTGTCCAGAGGCAACCGAAACACGTCAGAG
GCCAAAATGTAGAGATGTCCATGTTGAATGCCTATAAACCCAAGAGCAAGGCTAAAGAGC
TGCCTCTTTCTGCTGTACGTTTTATGGAAGAACTGGGTGAATGTGCCTTTGGAAAGATCT
ATAAGGGCCATCTCTATCTCCCAGGCATGGACCATGCTCAGTTAGTTGCCATAAAGACCT
TGAAAGACTATAACAACCCCCAGCAGTGGACAGAATTTCAACAGGAAGCCTCCCTGATGG
CCGAACTTCATCACCCCAATATTGTCTGCCTTCTGGGGGCTGTCACTCAGGAACAACCTG
TGTGTATGCTTTTTGAGTATATGAATCAGGGGGATCTCCACGAGTTCCTCATCATGCGGT
CCCCACACTCAGATGTTGGCTGTAGCAGTGATGAAGATGGGACAGTAAAATCCAGCCTGG
ATCACGGAGATTTTCTACACATTGCGATTCAGATTGCAGCTGGCATGGAGTACCTGTCCA
GTCACTTCTTTGTCCATAAGGACCTCGCGGCTCGCAATATTCTCATCGGAGAGCAGCTTC
ACGTAAAGATTTCAGACCTTGGGCTTTCCAGAGAAATATACTCTGCTGATTACTACAGGG

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

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               72-284, gnl|bosTau2|chr3 (54045413-54045625)
               

               
               72-284, gnl|Hg17|chr1 (64336684-64336896)
               

               
               72-284, gnl|Mm7|chr4 (99802352-99802564)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               72-284, gnl|bosTau2|chr3 (54045413-54045625)
               

               
               72-284, gnl|Hg17|chr1 (64336684-64336896)
               

               
               72-284, gnl|Mm7|chr4 (99802352-99802564)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               hea (0.204499)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hea (0.204499)

	72-284, gnl\|bosTau2\|chr3 (54045413-54045625)
	72-284, gnl\|Hg17\|chr1 (64336684-64336896)
	72-284, gnl\|Mm7\|chr4 (99802352-99802564)