Non-Coding RNA Search

Ss1.1-Pig4-TMW8057G23.3

Sequence:


               
               CTACAATACATTTTGTGTTGCTTGTTGGATGAATTTGCATGTTAACTGTAGGCCAATATA
GATTTGCCTTTAAAACTCCAAAAGAGCTACATAGTCATCATTAGTTTCTATTAATTATGC
ATCAAACGAAAAAAGCCATTTGTTACCAAACTGGAAAACCAGAGGCTTTTCTTAATGACT
TCACATACTGTAACAACTATGAATTTAAATTTGTGAAACTGCTCTGGTTGCTCTAAGCAT
AATTAAGAATGTTTGTAATTAATAGGTTGCTAATTATTTATTATAGTTAAAAAGGAAAAA
AAGGCATAAAATGACCTTCTACTGATTAGATTTTCAGTTTGTCCCTAAACTGGAAATGCC
TCATCATAAATAGGATCTATGATTTTGTCTAATAAAATACAACAAATCAATGTTTATGTA
AAATATTAATATAAATATGTAAGAATGAAAATAATCTAAATCCAGAAAATGGCAGTCTTA
AAAGTTAATGGAACAGATTGTATTAATGTAACCAGGACTGTGTAGAAGTAGAAAGAAAAA
TTCTTTTTTAAACCAGAGCAAATATTAAAAACCATTGCAGAAAATAGTGGATTTTGGATT
CCAAACATTTTCGACTGTGTAATGGAGATTTTTCTGTAATTTTCTTATCACTGGGTCTTT
TTTAACGTATTCATTAAGTTTACCAAAAGTTACTGTAGCTTAAAAGGTTTTGTGAGCACT
AACTATTGGCAGAAACTGCACTTGCAAATAAAAATAAATGTTTGCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACAATACATTTTGTGTTGCTTGTTGGATGAATTTGCATGTTAACTGTAGGCCAATATA
GATTTGCCTTTAAAACTCCAAAAGAGCTACATAGTCATCATTAGTTTCTATTAATTATGC
ATCAAACGAAAAAAGCCATTTGTTACCAAACTGGAAAACCAGAGGCTTTTCTTAATGACT
TCACATACTGTAACAACTATGAATTTAAATTTGTGAAACTGCTCTGGTTGCTCTAAGCAT
AATTAAGAATGTTTGTAATTAATAGGTTGCTAATTATTTATTATAGTTAAAAAGGAAAAA
AAGGCATAAAATGACCTTCTACTGATTAGATTTTCAGTTTGTCCCTAAACTGGAAATGCC
TCATCATAAATAGGATCTATGATTTTGTCTAATAAAATACAACAAATCAATGTTTATGTA
AAATATTAATATAAATATGTAAGAATGAAAATAATCTAAATCCAGAAAATGGCAGTCTTA
AAAGTTAATGGAACAGATTGTATTAATGTAACCAGGACTGTGTAGAAGTAGAAAGAAAAA
TTCTTTTTTAAACCAGAGCAAATATTAAAAACCATTGCAGAAAATAGTGGATTTTGGATT
CCAAACATTTTCGACTGTGTAATGGAGATTTTTCTGTAATTTTCTTATCACTGGGTCTTT
TTTAACGTATTCATTAAGTTTACCAAAAGTTACTGTAGCTTAAAAGGTTTTGTGAGCACT
AACTATTGGCAGAAACTGCACTTGCAAATAAAAATAAATGTTTGCCCT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-766, gnl|bosTau2|chr13 (553764-554535)
               

               
               1-766, gnl|Hg17|chr20 (9466816-9466041)
               

               
               1-766, gnl|Mm7|chr2 (135822753-135821961)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-766, gnl|bosTau2|chr13 (553764-554535)
               

               
               1-766, gnl|Hg17|chr20 (9466816-9466041)
               

               
               1-766, gnl|Mm7|chr2 (135822753-135821961)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               fco (0.314416)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.314416)

	1-766, gnl\|bosTau2\|chr13 (553764-554535)
	1-766, gnl\|Hg17\|chr20 (9466816-9466041)
	1-766, gnl\|Mm7\|chr2 (135822753-135821961)