Non-Coding RNA Search

Ss1.1-Pig4-TMW8057J07.3

Sequence:


               
               AATTGGAGCTGCAGCTGCCAGCCACAGCCACAGCCACAGCCACAGACATGTGGGATCTGA
GCCTTGTCTGCGACCTGCACCACTGTTCACAGCAAAGCTGGATCCTTAACCCACTGATCG
GGGCCAGGATTTGAACCCATGTCCTCATGGTTACTAGGTGGGTTTGTTACTGCTGAGCCA
CAGTGGGAACTCCTGGTTTGTTTTTTTTTAAATCAAGACTTTGAGAACCTGGATTTCTTC
TCCTCCTTACATTTTTTTCCAGGCCCCTTATGTCCATTTTAGGGAAAAATCTCCCTTCCT
AATGTCATAGTCTGTGCCAAGCTCTTCTGGGGCATCAGCAAGCCCCACCACTGCCCTCTG
CACATTGCGTTATAATTGGCTGCTAGGCTTCCCTACAAGATTGAGGGTCTTGTGCCTTAT
AGATCTTTGTATCTCCCTGCCTGGCACATAATAAGGAATGAATGAGCATTTACCTTCTCG
AGAAGTGTACCTTCTTTGTTTCTGTATTGTGTGACCTCTTTATTAGAATGTTTGTTTTCT
TCTGACTTTCTATTTACCTCATATCGTCTTTATTTTCCATAGGCTGCTAAAAGTCATTAG
AGATAGTGACTAATGGTAGTCATAGTTTGTTGGAGGAATTATTTCTTATTTGAAGACTGT
CTGGGATTGAAATAGCTCTTGAGAGGTTATGATATTGTACCCACCAAATGGAAATGACAT
ATGTTAAGTGTTAAATACAAAATAAATTATATTTAGTTTTTTGGTAGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AATTGGAGCTGCAGCTGCCAGCCACAGCCACAGCCACAGCCACAGACATGTGGGATCTGA
GCCTTGTCTGCGACCTGCACCACTGTTCACAGCAAAGCTGGATCCTTAACCCACTGATCG
GGGCCAGGATTTGAACCCATGTCCTCATGGTTACTAGGTGGGTTTGTTACTGCTGAGCCA
CAGTGGGAACTCCTGGTTTGTTTTTTTTTAAATCAAGACTTTGAGAACCTGGATTTCTTC
TCCTCCTTACATTTTTTTCCAGGCCCCTTATGTCCATTTTAGGGAAAAATCTCCCTTCCT
AATGTCATAGTCTGTGCCAAGCTCTTCTGGGGCATCAGCAAGCCCCACCACTGCCCTCTG
CACATTGCGTTATAATTGGCTGCTAGGCTTCCCTACAAGATTGAGGGTCTTGTGCCTTAT
AGATCTTTGTATCTCCCTGCCTGGCACATAATAAGGAATGAATGAGCATTTACCTTCTCG
AGAAGTGTACCTTCTTTGTTTCTGTATTGTGTGACCTCTTTATTAGAATGTTTGTTTTCT
TCTGACTTTCTATTTACCTCATATCGTCTTTATTTTCCATAGGCTGCTAAAAGTCATTAG
AGATAGTGACTAATGGTAGTCATAGTTTGTTGGAGGAATTATTTCTTATTTGAAGACTGT
CTGGGATTGAAATAGCTCTTGAGAGGTTATGATATTGTACCCACCAAATGGAAATGACAT
ATGTTAAGTGTTAAATACAAAATAAATTATATTTAGTTTTTTGGTAGA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               202-747, gnl|bosTau2|chr2 (78804163-78804697)
               

               
               202-747, gnl|Hg17|chr12 (24861758-24860832)
               

               
               202-747, gnl|Mm7|chr6 (145090563-145090041)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               202-747, gnl|bosTau2|chr2 (78804163-78804697)
               

               
               202-747, gnl|Hg17|chr12 (24861758-24860832)
               

               
               202-747, gnl|Mm7|chr6 (145090563-145090041)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               kid (0.129735)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               kid (0.129735)

	202-747, gnl\|bosTau2\|chr2 (78804163-78804697)
	202-747, gnl\|Hg17\|chr12 (24861758-24860832)
	202-747, gnl\|Mm7\|chr6 (145090563-145090041)