Non-Coding RNA Search

Ss1.1-Pig4-TMW8057M21.3

Sequence:


               
               CATGTCCTATTAATAAGGGCATGGTATAATAGATTATGGTGCCTTCCTTCAGGTTCTTTC
CTTGAAGAGTGAGAAATATCTCTGGAATAATATGTCCCAACTTTACTCTTAAAAAGTTGT
GCAAGCATTTTTTTTTTTTTTTTTTTTTTGGTAAAATAACTTGTTCTAAAAAATTGTGGA
GAGGTAACCCCACATTGTTATCAGTGGCTCTATGAGGGAGTGGAATTATGGCAGAACTTT
CATGATTGGCTTTATATATTTCTATAATGTTTTAATTTTCTATAAGCATGTATTTTGTAA
ACTTAAATAAAGAAAAAAGCCCACTACATTTGATCCCTGAGAGATTCTAATATGCCTAAG
AGGAAAAATCATGGAGGTGATCAGTATTCCAAAGCTTAGCCCAAAGGCCAAGGAGAATTC
ACTACAACGAAGAGGTGAGAGCGGTGGCCCCTGCTAACCTGTCCAGCAAAGCTTCAGCTT
GTGTGTTTGTTAGACATAAGTGTCAAATTCCAAAGAACTTGAAAAAAAAATCCATTTCCC
TGCTTCATTCTGCGCTGTGTTACGGTGCTCTTGAATCCTCTTGCAGAAAGTTCATCTACC
ATGTGGTCATGAGCCCCGTGAAATTTTAAGCAGAAATTCATGCATGTTCCTTTCTTGGAA
CCTCAACCCAGGTTAAACCTCAGTCTCCTCCTCTGCCTATGCCTTGGGTACTCAAGCTGT
AACATAGAGAAAGATTGCCTCTTTATGCAATTGTTGGCTCAGACTGCTTCTGCAATTAAC
CGCTTTCCCTTCTGCACCATAAATCCCTTTTCTTGTTGCCAAATGAGTCTCATCATCAAA
TATGTTGTATTTAAATAATTATTAAATAAGTGTTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CATGTCCTATTAATAAGGGCATGGTATAATAGATTATGGTGCCTTCCTTCAGGTTCTTTC
CTTGAAGAGTGAGAAATATCTCTGGAATAATATGTCCCAACTTTACTCTTAAAAAGTTGT
GCAAGCATTTTTTTTTTTTTTTTTTTTTTGGTAAAATAACTTGTTCTAAAAAATTGTGGA
GAGGTAACCCCACATTGTTATCAGTGGCTCTATGAGGGAGTGGAATTATGGCAGAACTTT
CATGATTGGCTTTATATATTTCTATAATGTTTTAATTTTCTATAAGCATGTATTTTGTAA
ACTTAAATAAAGAAAAAAGCCCACTACATTTGATCCCTGAGAGATTCTAATATGCCTAAG
AGGAAAAATCATGGAGGTGATCAGTATTCCAAAGCTTAGCCCAAAGGCCAAGGAGAATTC
ACTACAACGAAGAGGTGAGAGCGGTGGCCCCTGCTAACCTGTCCAGCAAAGCTTCAGCTT
GTGTGTTTGTTAGACATAAGTGTCAAATTCCAAAGAACTTGAAAAAAAAATCCATTTCCC
TGCTTCATTCTGCGCTGTGTTACGGTGCTCTTGAATCCTCTTGCAGAAAGTTCATCTACC
ATGTGGTCATGAGCCCCGTGAAATTTTAAGCAGAAATTCATGCATGTTCCTTTCTTGGAA
CCTCAACCCAGGTTAAACCTCAGTCTCCTCCTCTGCCTATGCCTTGGGTACTCAAGCTGT
AACATAGAGAAAGATTGCCTCTTTATGCAATTGTTGGCTCAGACTGCTTCTGCAATTAAC
CGCTTTCCCTTCTGCACCATAAATCCCTTTTCTTGTTGCCAAATGAGTCTCATCATCAAA
TATGTTGTATTTAAATAATTATTAAATAAGTGTTTA

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               27-656, gnl|bosTau2|chr17 (573560-574193)
               

               
               27-656, gnl|Hg17|chr4 (155814058-155813444)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-656, gnl|bosTau2|chr17 (573560-574193)
               

               
               27-656, gnl|Hg17|chr4 (155814058-155813444)

Expressed library(ies): 2 entry(ies)

More info

Expressed library(ies): 2 entry(ies)

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               col (0.195008)
               

               
               csk (0.140746)

Expressed library(ies): 2 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               col (0.195008)
               

               
               csk (0.140746)

	27-656, gnl\|bosTau2\|chr17 (573560-574193)
	27-656, gnl\|Hg17\|chr4 (155814058-155813444)