Non-Coding RNA Search

Ss1.1-Pig4-TMW8057N05.5

Sequence:


               
               TTGGCCTACTGGATTCATAGAGCCAGCGGGCGCAGGCGGGACGGGCGCCCTGCGGCCGGA
CCCAGCCAGGGCACCACGCTGCCCGGCCCTGCGCCGGCAGGCATCTCTTCTTGGGGCTCC
TGGGGACGCCAGAAGAAAATCAATCTTTGCTGTTTCTTTTTGACCCGCGTTGGAGCTTCG
ATTTTTTTCCCCCCTTTCTTTCTTTCTTTCTTACTTTTGAATGAACTGGTTTCTTGGCTG
GATGGTTCAACTTCTTTCCTGGCTGTGAACTTTTCCCCGGTTGTTTTCTTTGACAACCGC
TGGAGAAAGTGCGCTGTGCTTCGAGGCGAGTGATGAAGTTGGGAATGCGTGGCAGTGTGT
GCGTGCTTGTGTAACTCGAGCCGCCCCGTCTGTTTCGATCTGCGCTGCGGAGCCTCCTCT
CAGGGCCCTCTCCACCTGCTGCGGTTACGCGGTGATCGTGGGTATTAGCGCGTCCAGGCA
GTTAACTGGCCCGCGCTGGGGCTACGTTGGAGGAAGATTGCCTCGCTACAGCCCAAGTCG
GGGCTGACTCAACGAGTCGATGTAGACAGCGGCTGGCTTCCGAAGAGTGCGTGCCTGCGT
GCGTGTGACTCGGCCTCTGCTCGACTCCCACCAAACCACAGGATCAGCCACAAACTTAAC
CAACATCCCCAAACCCGAGTTCTCAGATGTGGAGAGCTGAACCCTGAGTGTCATCGACTT
GGAATTTTTTTTTTTTTTAAGATTAGCTTTTCTTTGAAAAGCATAATTTTCTGAACTGAA
CATTTTGCCAGAATTTATTGAGAGAACATGACAAGTACTTCTAGCACAGCCCTTCTGCAA
CTACTGAAGTTGATTTTCAAGGCTACTTAAAAAACAACAAAAACCCTGCAGCGAACATTA
ATGGATTTCTGTTGTGTTTAAATTCTCTACAGATTGTATTGTAAATATTTTATGAAGTAG
AGCATATGTATATATTTATATATATGTGTGCACATACATTAGAAGCAAGACCTTTGGAAG
TCTCAGCTCTCGCCTTTGAGGACGGAAGCTAGTTTTGCATGATAAAAAGTGTCTCTGTAT
TTGGAAGACACTTGTGTATTTTGTGTTGTTTGACTTTAGACAAAACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGCCTACTGGATTCATAGAGCCAGCGGGCGCAGGCGGGACGGGCGCCCTGCGGCCGGA
CCCAGCCAGGGCACCACGCTGCCCGGCCCTGCGCCGGCAGGCATCTCTTCTTGGGGCTCC
TGGGGACGCCAGAAGAAAATCAATCTTTGCTGTTTCTTTTTGACCCGCGTTGGAGCTTCG
ATTTTTTTCCCCCCTTTCTTTCTTTCTTTCTTACTTTTGAATGAACTGGTTTCTTGGCTG
GATGGTTCAACTTCTTTCCTGGCTGTGAACTTTTCCCCGGTTGTTTTCTTTGACAACCGC
TGGAGAAAGTGCGCTGTGCTTCGAGGCGAGTGATGAAGTTGGGAATGCGTGGCAGTGTGT
GCGTGCTTGTGTAACTCGAGCCGCCCCGTCTGTTTCGATCTGCGCTGCGGAGCCTCCTCT
CAGGGCCCTCTCCACCTGCTGCGGTTACGCGGTGATCGTGGGTATTAGCGCGTCCAGGCA
GTTAACTGGCCCGCGCTGGGGCTACGTTGGAGGAAGATTGCCTCGCTACAGCCCAAGTCG
GGGCTGACTCAACGAGTCGATGTAGACAGCGGCTGGCTTCCGAAGAGTGCGTGCCTGCGT
GCGTGTGACTCGGCCTCTGCTCGACTCCCACCAAACCACAGGATCAGCCACAAACTTAAC
CAACATCCCCAAACCCGAGTTCTCAGATGTGGAGAGCTGAACCCTGAGTGTCATCGACTT
GGAATTTTTTTTTTTTTTAAGATTAGCTTTTCTTTGAAAAGCATAATTTTCTGAACTGAA
CATTTTGCCAGAATTTATTGAGAGAACATGACAAGTACTTCTAGCACAGCCCTTCTGCAA
CTACTGAAGTTGATTTTCAAGGCTACTTAAAAAACAACAAAAACCCTGCAGCGAACATTA
ATGGATTTCTGTTGTGTTTAAATTCTCTACAGATTGTATTGTAAATATTTTATGAAGTAG
AGCATATGTATATATTTATATATATGTGTGCACATACATTAGAAGCAAGACCTTTGGAAG
TCTCAGCTCTCGCCTTTGAGGACGGAAGCTAGTTTTGCATGATAAAAAGTGTCTCTGTAT
TTGGAAGACACTTGTGTATTTTGTGTTGTTTGACTTTAGACAAAACTT

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               13-1127, gnl|bosTau2|chr1 (95840559-95841719)
               

               
               13-1127, gnl|Hg17|chr21 (35182860-35181729)
               

               
               13-1127, gnl|Mm7|chr16 (92751512-92750406)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-1127, gnl|bosTau2|chr1 (95840559-95841719)
               

               
               13-1127, gnl|Hg17|chr21 (35182860-35181729)
               

               
               13-1127, gnl|Mm7|chr16 (92751512-92750406)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pla (0.133672)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pla (0.133672)

	13-1127, gnl\|bosTau2\|chr1 (95840559-95841719)
	13-1127, gnl\|Hg17\|chr21 (35182860-35181729)
	13-1127, gnl\|Mm7\|chr16 (92751512-92750406)