Non-Coding RNA Search

Ss1.1-Pig4-TMW8057N23.5

Sequence:


               
               CAAGAACGAGCTGCACAAGTTCAAGAGTAAGATCATGAGTGAACTGGTCAGCAATGGCGT
CCAGATATATCAGTTCCCCACCGATGAAGAAACAGTGGCAGAGATTAATGCAACGATGAG
TGTCCACCTCCCGTTCGCCGTGGTGGGCAGCACCGAAGAGGTGAAGATTGGCAACAAGAT
GGCAAAGGCCAGGCAGTACCCCTGGGGCGTTGTGCAGGTTGAGAATGAAAACCATTGCGA
TTTGTGAAACTCCGGGAGATGCTGATCCGTGTGAACATGGAAGATTTGCGAGAACAGACT
CACACCCGCCATTATGAACTGTATCGGCGCTGCAAGCTCGAAGAGATGGGGTTCAAGGAC
ACTGATCCTGACAGCAAACCCTTCAGCCTTCAGGAGACCTACGAAGCAAAAAGGAATGAA
TTTCTGGGAGAACTTCAGAAGAAAGAAGAAGAAATGAGACAGATGTTTGTCATGAGAGTG
AAGGAAAAAGAAGCTGAACTGAAAGAGGCAGAGAAAGAGCTCCACGAGAAGTTCGACCTC
CTCAAGCGGACACACCAAGAAGAGAAGAAGAAGGTGGAGGACAAGAAGAAGGAGCTGGAG
GAGGAGGTGAACAGTTTCCAGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAAGAACGAGCTGCACAAGTTCAAGAGTAAGATCATGAGTGAACTGGTCAGCAATGGCGT
CCAGATATATCAGTTCCCCACCGATGAAGAAACAGTGGCAGAGATTAATGCAACGATGAG
TGTCCACCTCCCGTTCGCCGTGGTGGGCAGCACCGAAGAGGTGAAGATTGGCAACAAGAT
GGCAAAGGCCAGGCAGTACCCCTGGGGCGTTGTGCAGGTTGAGAATGAAAACCATTGCGA
TTTGTGAAACTCCGGGAGATGCTGATCCGTGTGAACATGGAAGATTTGCGAGAACAGACT
CACACCCGCCATTATGAACTGTATCGGCGCTGCAAGCTCGAAGAGATGGGGTTCAAGGAC
ACTGATCCTGACAGCAAACCCTTCAGCCTTCAGGAGACCTACGAAGCAAAAAGGAATGAA
TTTCTGGGAGAACTTCAGAAGAAAGAAGAAGAAATGAGACAGATGTTTGTCATGAGAGTG
AAGGAAAAAGAAGCTGAACTGAAAGAGGCAGAGAAAGAGCTCCACGAGAAGTTCGACCTC
CTCAAGCGGACACACCAAGAAGAGAAGAAGAAGGTGGAGGACAAGAAGAAGGAGCTGGAG
GAGGAGGTGAACAGTTTCCAGAAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-618, gnl|bosTau2|chr16 (36125605-36126216)
               

               
               2-618, gnl|Hg17|chrX (118565901-118545255)
               

               
               2-618, gnl|Mm7|chrX (31701937-31682695)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-618, gnl|bosTau2|chr16 (36125605-36126216)
               

               
               2-618, gnl|Hg17|chrX (118565901-118545255)
               

               
               2-618, gnl|Mm7|chrX (31701937-31682695)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	2-618, gnl\|bosTau2\|chr16 (36125605-36126216)
	2-618, gnl\|Hg17\|chrX (118565901-118545255)
	2-618, gnl\|Mm7\|chrX (31701937-31682695)