Non-Coding RNA Search

Ss1.1-Pig4-TMW8057O02.5

Sequence:


               
               GAAATAGCGAAAAGATAAAAAACA------------------------CCTCGTCAGATT
CATTAACCACTGCGCCACGATGGGAACTCCTATTTTGTTATAACTTTAAATGGAGTATAA
TCTATACAAGTATTGAATTGCTGTGCTGTATACCTGAAATATAATATTGTAAATCAACAA
TACCTCAAGGAAAAAAAAAAAAAAAGGTGGTGCCTTAAGTCAGTCGGGGGAAAAGATGGA
CTATAAAAATGAATGGTATTGGTATCACTGGATACCCATACAGAAAATGAAAAAAAGATC
TATTCCTAACAATATGTGCCAAGATAATTTTCAAATTGAGTAGAGATTTAGATGTACAAT
ATTAAACCATACAATGACTGGAAAAAAGTAAGATGAATTCCTCAGTAGACCAGCTTGTCC
AAACCTGTGAGTCTACTTTTAGGCTGTGGGAGATAAGAATTTTTTTCACTTTTGAAGGAT
TTAATAAACTAGGAGGAGGAAAAGGACATGAACAAAATTGGTTGTAAACCCTAAAATATT
TGCTGAAATATTTTTATTTTTAACGGTTGTCAGCCCCTACTATGTGACTTGGGAGTGAGG
AAAACTTCCTAACGGTACTGGTTAGTTATTGCATGAAAACGCCACTGAGGCAGCTCTGCT
CCACGTGTCTTTCAGTTCTCTTGGACCAGTAGGAAACTATTTTCCACCCCTTTGGTGAAA
GAGATTATAAATTAACATGGCAAAGGATGGGAATACAGAGAAGGGTGAAGATTTAAGGCC
AGTAAAGTAATTCTCCAGACTAAGTATGACTTGAAACTCCAGATACAACAGAGAGATCGT
TGACTATGCCAAAAACAAACAAACCAACCAACCCACCAACAAACAAAAAGACACCTTTTG
CATCCCAAATATACCAAAGTAAAATACAACAGATAACTGGGAAAACGTACTTTCAATTTA
TTTCACAAATTAACAGCTTCTAAAAATAGAGAAGGTCCTATGGGAAACTAGGGAAAGGAG
ATGAAGACTGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAATAGCGAAAAGATAAAAAACA------------------------CCTCGTCAGATT
CATTAACCACTGCGCCACGATGGGAACTCCTATTTTGTTATAACTTTAAATGGAGTATAA
TCTATACAAGTATTGAATTGCTGTGCTGTATACCTGAAATATAATATTGTAAATCAACAA
TACCTCAAGGAAAAAAAAAAAAAAAGGTGGTGCCTTAAGTCAGTCGGGGGAAAAGATGGA
CTATAAAAATGAATGGTATTGGTATCACTGGATACCCATACAGAAAATGAAAAAAAGATC
TATTCCTAACAATATGTGCCAAGATAATTTTCAAATTGAGTAGAGATTTAGATGTACAAT
ATTAAACCATACAATGACTGGAAAAAAGTAAGATGAATTCCTCAGTAGACCAGCTTGTCC
AAACCTGTGAGTCTACTTTTAGGCTGTGGGAGATAAGAATTTTTTTCACTTTTGAAGGAT
TTAATAAACTAGGAGGAGGAAAAGGACATGAACAAAATTGGTTGTAAACCCTAAAATATT
TGCTGAAATATTTTTATTTTTAACGGTTGTCAGCCCCTACTATGTGACTTGGGAGTGAGG
AAAACTTCCTAACGGTACTGGTTAGTTATTGCATGAAAACGCCACTGAGGCAGCTCTGCT
CCACGTGTCTTTCAGTTCTCTTGGACCAGTAGGAAACTATTTTCCACCCCTTTGGTGAAA
GAGATTATAAATTAACATGGCAAAGGATGGGAATACAGAGAAGGGTGAAGATTTAAGGCC
AGTAAAGTAATTCTCCAGACTAAGTATGACTTGAAACTCCAGATACAACAGAGAGATCGT
TGACTATGCCAAAAACAAACAAACCAACCAACCCACCAACAAACAAAAAGACACCTTTTG
CATCCCAAATATACCAAAGTAAAATACAACAGATAACTGGGAAAACGTACTTTCAATTTA
TTTCACAAATTAACAGCTTCTAAAAATAGAGAAGGTCCTATGGGAAACTAGGGAAAGGAG
ATGAAGACTGTT

Aligned organism(s): 1 entry(ies)

More info

Aligned organism(s): 1 entry(ies)

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               67-177, gnl|bosTau2|chr11 (52832664-52832555)

Aligned organism(s): 1 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-177, gnl|bosTau2|chr11 (52832664-52832555)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               hyp (0.142837)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               hyp (0.142837)