Non-Coding RNA Search

Ss1.1-Pig4-TMW8058B15.3

Sequence:


               
               TTAATACCCACTTAAAATGATAGTACTTTGCCCTTTTATACCCATCAGGCCCAAACCATA
ATGGCAAGCTGCCAGCTAAGTTGTATTTTAATATGGGTTTGATGGGTTGAACAAGCCACA
TTGGCCAGAAAGACACTATCTCTACCCTGGACTCTTGCAGGGTAAGTCCCATGACATGAG
ACATTGGTATCAGTGGTTCAGGGAACTTCTTGAATTGTATGAAAGTTGTATCCTCCAGGG
TAGACTGCTGTTGTTAACTAGTAGTCTAGTAACCTCCCTGCTCATCAAAATCTGTTGCCT
GTCATTCTCCTGGTCATTTGTGAAGACAGCATATTGAAGTCTGTGCTTTGCCTCTCATCT
TGTAAATAATGCTTAACACACTCTTGTATTTACACCAAGATCCAAAACAGTCCTGTTTCT
GCAGTATAGCCAATTTAAGCCTGGCTTTTATATTTAAAAAACCAGAAACTGTGCCAAAGA
TCACAGAATAGTAAATAAATGCTCAGTATTGACCACTTGCACCTGAAATCTATAACAGAA
TGATCCCAAGTGGTCAGGTAAACATTAAATTCAATGTGAATTTTATTTGATTCAATGTGA
ATTTTAAAATGCAAATACAAATGTTGTTTATAGGAAGAAAATCTCAATATAAATACAGTT
GAATCAGTAACTTATCTTGGGCTGAATGGTTCTACTCCCTTGGCAGGATGCTCCTGTTTA
AGGCACTAGAGTTGGCAGAGCTGTTTGTGAACTGCAGGTCATCCTTATTTTGAACTGAGT
TTGTAACCAGCCTCTTAACACTGTGCTGTTAACTCATAAAGGAGAACTGTGTTCCATTTC
AGTCCCAATAAACATTTCTGTCATTCTTTGTTCCCCACATCTTTCTTCCTTCATCTGGTC
TCATACCTCACTCAGTCGAGTGTGGGAAGGGAGAGACCTGGTTTGTTGATTCATATTGTA
CATAGTTTATTGTTTTCAAAACTGTGTTTATAACCAAGAATGAAAAAGTGGGGCTTGAGG
AACAGTAAACTGATTCTACAATGTTAATCAGTGGGGAGTATAAAGCTGAAGTAACAGTTC
CTTTAGGAACAGTATGTGCATAATTTAACTTTAATGAAAGGGAAGATAAAAGCTGGTTCA
AAATTACTCCAATAGTTGCTATACAGCTGAAGTTAACATTGTAAATCAACTATACTTCAA
TAAAAAGTTTTTTTAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAATACCCACTTAAAATGATAGTACTTTGCCCTTTTATACCCATCAGGCCCAAACCATA
ATGGCAAGCTGCCAGCTAAGTTGTATTTTAATATGGGTTTGATGGGTTGAACAAGCCACA
TTGGCCAGAAAGACACTATCTCTACCCTGGACTCTTGCAGGGTAAGTCCCATGACATGAG
ACATTGGTATCAGTGGTTCAGGGAACTTCTTGAATTGTATGAAAGTTGTATCCTCCAGGG
TAGACTGCTGTTGTTAACTAGTAGTCTAGTAACCTCCCTGCTCATCAAAATCTGTTGCCT
GTCATTCTCCTGGTCATTTGTGAAGACAGCATATTGAAGTCTGTGCTTTGCCTCTCATCT
TGTAAATAATGCTTAACACACTCTTGTATTTACACCAAGATCCAAAACAGTCCTGTTTCT
GCAGTATAGCCAATTTAAGCCTGGCTTTTATATTTAAAAAACCAGAAACTGTGCCAAAGA
TCACAGAATAGTAAATAAATGCTCAGTATTGACCACTTGCACCTGAAATCTATAACAGAA
TGATCCCAAGTGGTCAGGTAAACATTAAATTCAATGTGAATTTTATTTGATTCAATGTGA
ATTTTAAAATGCAAATACAAATGTTGTTTATAGGAAGAAAATCTCAATATAAATACAGTT
GAATCAGTAACTTATCTTGGGCTGAATGGTTCTACTCCCTTGGCAGGATGCTCCTGTTTA
AGGCACTAGAGTTGGCAGAGCTGTTTGTGAACTGCAGGTCATCCTTATTTTGAACTGAGT
TTGTAACCAGCCTCTTAACACTGTGCTGTTAACTCATAAAGGAGAACTGTGTTCCATTTC
AGTCCCAATAAACATTTCTGTCATTCTTTGTTCCCCACATCTTTCTTCCTTCATCTGGTC
TCATACCTCACTCAGTCGAGTGTGGGAAGGGAGAGACCTGGTTTGTTGATTCATATTGTA
CATAGTTTATTGTTTTCAAAACTGTGTTTATAACCAAGAATGAAAAAGTGGGGCTTGAGG
AACAGTAAACTGATTCTACAATGTTAATCAGTGGGGAGTATAAAGCTGAAGTAACAGTTC
CTTTAGGAACAGTATGTGCATAATTTAACTTTAATGAAAGGGAAGATAAAAGCTGGTTCA
AAATTACTCCAATAGTTGCTATACAGCTGAAGTTAACATTGTAAATCAACTATACTTCAA
TAAAAAGTTTTTTTAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-1153, gnl|bosTau2|chr8 (18689848-18688698)
               

               
               4-1153, gnl|Hg17|chr9 (4576619-4578043)
               

               
               4-1153, gnl|Mm7|chr19 (28612857-28614085)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-1153, gnl|bosTau2|chr8 (18689848-18688698)
               

               
               4-1153, gnl|Hg17|chr9 (4576619-4578043)
               

               
               4-1153, gnl|Mm7|chr19 (28612857-28614085)

Expressed library(ies): 4 entry(ies)

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Expressed library(ies): 4 entry(ies)

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               cbl (0.229595)
               

               
               jej (0.197844)
               

               
               sin (0.174948)
               

               
               nje (0.16592)

Expressed library(ies): 4 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               cbl (0.229595)
               

               
               jej (0.197844)
               

               
               sin (0.174948)
               

               
               nje (0.16592)

	4-1153, gnl\|bosTau2\|chr8 (18689848-18688698)
	4-1153, gnl\|Hg17\|chr9 (4576619-4578043)
	4-1153, gnl\|Mm7\|chr19 (28612857-28614085)